G9153


Basic Information

Item Value
gene id G9153
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 53794078 ~ 53829780 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11338
TGGTCTGGTAGTAGTCGTAGACCTTGACCACAGCTGGTTTGAGGTTGTTCACTGGGTGCTTCTGGGTCATGGTGATGTGATAGTGATAGGTTTTTCCCCTTGTGAGCAGGCCGTGTCTGAATACACCTCTCCATGTCCTGACAATCGTGGACAAGACATCAATGTAGTGTAAAAGCAAAGCGTGGACTGCGGAAACCATTCAGTAACACACGCATGTATTTAGCTGTCAAATCAAATACCCAAAAGGCACCACAGACCTGCACAAGCCCAGTTCTTCTCTTCTTGTCATTTGTCAGATGGAAGATTCAGTGGTTACTtcttaataaaatgaat
>TU11339
TTAAAAGCCTTCTTATATTGGTATAAAAAAAACCTATTCACAGTGATGAACAATACAGTGCTGCTTGACCCTGACCACCACAGAACACAAGCACCTTGAGATTCtcagagagaaaaggaaattatttaatatagttttaaaatacatacattcaataGTTTGTATTCAAGCTGTGACAATGACAGAGGCCTGTACAGTAGAAAACGTGTGGCATTAGCCAATGAACAAACTGGATACATTGCAATACCTGGTACGGAAAAACACTATGATaccatatttgaaaataaaaacccaagTTTTCAATGTGTTGAACAGGATCTCTTTATAGCATGTTCCAGTACTGGAGGCTATGTACATTTCAGCTTATAGGTACCTGTCTGTCCCTCAATATGTGGTCCTTATGTCTTGTAGGTGAGCAGGCCGTGTCTGAATACACCTCTCCATGTCCTGACAATCGTGGACAAGACATCAATGTAGTGTAAAAGCAAAGCGTGGACTGCGGAAACCATTCAGTAACACACGCATGTATTTAGCTGTCAAATCAAATACCCAAAAGGCACCACAGACCTGCACAAGCCCAGTTCTTCTCTTCTTGTCATTTGTCAGATGGAAGATTCAGTGGTTACTtcttaataaaatgaat

Function

GO:

id name namespace
GO:0004806 triglyceride lipase activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU11338 False 333 lncRNA 0.68 3 53794078 53829780
TU11339 True 643 lncRNA 0.62 2 53794078 53795344

Neighbor

gene id symbol gene type direction distance location
AMCG00004560 NA coding downstream 166196 53618422 ~ 53627882 (-)
AMCG00004562 usf1,LOC107657261,LOC107601709 coding downstream 182809 53607807 ~ 53611269 (-)
AMCG00004561 NA coding downstream 188662 53587275 ~ 53605416 (-)
AMCG00004558 LOC102781260 coding downstream 207866 53573530 ~ 53586212 (-)
AMCG00004559 NA coding downstream 260241 53526868 ~ 53533837 (-)
AMCG00004569 tecta coding upstream 48495 53878275 ~ 53905023 (-)
AMCG00004572 NA coding upstream 80597 53910377 ~ 53928613 (-)
AMCG00004571 LOC105907815,LOC100708948,LOC105920897,LOC103369551,LOC102197023 coding upstream 105964 53935744 ~ 53949364 (-)
AMCG00004573 NA coding upstream 134205 53963985 ~ 53965707 (-)
AMCG00004570 NA coding upstream 149965 53979745 ~ 53988395 (-)
G9149 NA non-coding downstream 71956 53721242 ~ 53722122 (-)
G9146 NA non-coding downstream 93493 53697376 ~ 53700585 (-)
G9145 NA non-coding downstream 98571 53694204 ~ 53695507 (-)
G9141 NA non-coding downstream 130832 53662384 ~ 53663246 (-)
G9074 NA non-coding downstream 300368 53493495 ~ 53493710 (-)
G9161 NA non-coding upstream 35171 53864951 ~ 53865675 (-)
G9217 NA non-coding upstream 256795 54086575 ~ 54087038 (-)
G9261 NA non-coding upstream 375773 54205553 ~ 54206013 (-)
G9273 NA non-coding upstream 428783 54258563 ~ 54273287 (-)
G9427 NA non-coding upstream 819271 54649051 ~ 54676988 (-)
AMCG00004551 NA other downstream 604685 53179022 ~ 53189393 (-)
G8937 NA other downstream 842691 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 882326 52898759 ~ 52911752 (-)
AMCG00004529 bco2 other downstream 919970 52850483 ~ 52874108 (-)
G8761 NA other downstream 1722492 52068053 ~ 52071586 (-)
AMCG00004575 NA other upstream 202854 54032634 ~ 54043428 (-)
AMCG00004590 LOC106612637 other upstream 526680 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 611991 54441771 ~ 54450341 (-)
G9414 NA other upstream 746860 54576640 ~ 54620055 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other upstream 1085804 54915584 ~ 54919938 (-)

Expression


Co-expression Network