G9273


Basic Information

Item Value
gene id G9273
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 54258563 ~ 54273287 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11477
CGACACACTCGTACACACAGGTGTTACAGCAcgacacaaactcacacacgcGTTACAGCacgacacacactcacagacacaccctCGTACACACACAGGCGTTACAGCACGACACACTCGTACACACAGGCATTACAGCATAacgcactctcacacacacagcgctcACCGATCTCGTCCTGCATCTCCTCAGTGACGTAGGGCACCTTGTACAGCAGAGACAGGCTCTGGTTCATCCGCTCCTCGATCACACGCAAGTGGGTCATCACCTGCAACGTCCGAGACACGGGCACAGACAAGCACACggtcaagagagagagacaggcacaCGGTCAGAGTGACAGATGGGCACACAGACGGGCACgcggtcagagagagagagagacacagggagagagacacacaagcCCACAGACAGGTAAACATACAGACAGgtagacacagagagagacgatCGGACACACGTTGTGTCTCACATTCCTACGGTTTCTCTGTCTGAGtgtcagacagagagacagacgggcagacagacagcaggTTTTCAAAGAAGGCGAATGACCGAAATCCGGCTCTTCTGTGCGGCAGCCCAGTGACGCCACACACCCCCCTGCTCCGAGCTGCAGTACCCAGCCGCCCACACCAGGGGGAGACCAACGCCAGGCAATGAGGGCCCATAACTCAGCGCAGTCCCGTCTCATCactcctcccacccccccaccctctccctgGCTTTGTTTCCGCCACATAATAGAGAGAGCGAGGCGCGatgaagaggggaaaaaaataaaaaatcagcaCAGACAAtggaggggagaaaaacaacaataaaacaaagccaCAGGATGCAGGCTGGGAGAGCGCGCCAGGCTAAAGAAAGGGCCCAGAACCGCGGCGTCCAGCTGCACGGCACAGCGCCACCGAAACCACCGGCACGGCAGGACAGACAGCTGCTCACACGGCATTTGATAGGGGTTAGAAAACAGGCCCATCCTTAGCCTTAAAGACAACAACAGTCTATTGAATGATCGAGGCAAAAATggtgccccctcccccccgccaGTGCAGAACTCTGTTTCCTGATGTGTGCAGTTCCTCCCGGAGGTGTTCTATATTTAAGATTGAGGTCAGGGCCAAGAAATGTTTTAGGATGCGCCGCGCCGGATGAGCGGATCGGCGCATAATGGGGTCATTTGAGCAATGAGGTAATGGAGTTGTATTCCTGCGTGTTATCTCTCGCCCCTGAATGATCAACCAGTGCTACAGTCGAGGTAAACAAAGggtttattataaaaacaacacaatacaacatgCAGTGAGGGAGCAAGCCATCAAAAATGATTGAGACACTTCCTTTCAGACATGAAGGGAGCGAGACGGCTTAATGATTAGAAAAGAAATTCCCCGAAAGAGCTAATCAACTGAGAACCCGAACCACCAAAGAGGAATAATCACACTCAGCCACAGAGCTCGTGAGGTTTAGTTTAAAGCGACTCGTTCACGTGGTCTGGCTGCCTGCCGCTCTCGCCGCGCCTCGGCTCCCGACTCGGGCCCCTACAGGTGAAAGCGAAAGTCTTTTTAAAGCGGGCACATCTCGGCCACCTCTCCCAACTCCTGCTCACGGAGACAGACCCTCGACGGAGGGAGGGAAGAAGGTGCCGATTGGCCGAGCGACCAGTAGGATCTGAAGGAGTCTCTCGTGGTGTGAACACGGCCGGCCCGGGGGGCTCCAACTCATATCTTCTCTCCCTCGAAGTACGGATCTTCTTCATTTGAGAAACACACACtagtgagtctctctctctctctctctctctctctctctctctctctctggggaaACAGCGTTGATTCGCTGTACGGGAGAGCGCTATGAGGGGCGTTCCTGCACAGTGCCGGATGCCCTTCAAAACGCCAACCTCGACACAGCACAGTCCCCGGGCCGCAGCCGGAGAAGGAGACCGGGGTGATTTTGTGCGATTGACTTTTTGGACACATCACGGACTACACTGTGAACAGCCGCCGCCGCCACCGCCACCTCTCCTCTTGTTCCCACTGACCTGGGACTTCATCTGAGCCGCCTTCTCGGGGTCGACGGCCAGGACGTGCTGGTAGTGCCGGATGGTGTGCTGGCGATCCTTGTTCTCGGCACGGACGTAACGCCTCAGGGCCTGCAGGATACGGTGACGCTGAGGGAtgaagagagatagagagagagagagagggggggagagagagagagagagagagagagagagaggcacagaggG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11477 True 2267 lncRNA 0.35 3 54258563 54273287

Neighbor

gene id symbol gene type direction distance location
AMCG00004583 NA coding downstream 32510 54223803 ~ 54226053 (-)
AMCG00004582 NA coding downstream 38695 54206080 ~ 54219868 (-)
AMCG00004581 NA coding downstream 53568 54195348 ~ 54204995 (-)
AMCG00004579 NA coding downstream 136076 54105061 ~ 54122487 (-)
AMCG00004574 ddx6 coding downstream 254013 53992451 ~ 54004550 (-)
AMCG00004589 NA coding upstream 57961 54331248 ~ 54342566 (-)
AMCG00004591 NA coding upstream 81720 54355007 ~ 54356449 (-)
AMCG00004592 NA coding upstream 100412 54373699 ~ 54373947 (-)
AMCG00004599 sidt2 coding upstream 121188 54394475 ~ 54398918 (-)
AMCG00004605 NA coding upstream 328172 54601459 ~ 54606827 (-)
G9261 NA non-coding downstream 52550 54205553 ~ 54206013 (-)
G9217 NA non-coding downstream 171525 54086575 ~ 54087038 (-)
G9161 NA non-coding downstream 392888 53864951 ~ 53865675 (-)
G9153 NA non-coding downstream 428783 53794078 ~ 53829780 (-)
G9149 NA non-coding downstream 536441 53721242 ~ 53722122 (-)
G9427 NA non-coding upstream 375764 54649051 ~ 54676988 (-)
G9431 NA non-coding upstream 404377 54677664 ~ 54677917 (-)
G9445 NA non-coding upstream 420059 54693346 ~ 54789735 (-)
G9461 NA non-coding upstream 513107 54786394 ~ 54788637 (-)
G9502 NA non-coding upstream 650242 54923529 ~ 54974997 (-)
AMCG00004575 NA other downstream 215135 54032634 ~ 54043428 (-)
AMCG00004567 NA other downstream 395194 53686416 ~ 53863369 (-)
AMCG00004551 NA other downstream 1069170 53179022 ~ 53189393 (-)
G8937 NA other downstream 1307176 52946812 ~ 52951387 (-)
AMCG00004533 NA other downstream 1346811 52898759 ~ 52911752 (-)
AMCG00004590 LOC106612637 other upstream 83173 54356460 ~ 54373627 (-)
AMCG00004598 NA other upstream 168484 54441771 ~ 54450341 (-)
G9414 NA other upstream 303353 54576640 ~ 54620055 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other upstream 642297 54915584 ~ 54919938 (-)
G9604 NA other upstream 1094298 55367585 ~ 55420058 (-)

Expression


Co-expression Network