G9656


Basic Information

Item Value
gene id G9656
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 55578276 ~ 55584995 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11973
gtgtgtggtgaatgCTACTGATCTgagaaagacaggaagagagaaagagtgagaatCAATAAAAGTACTTTACTTGCACAAAAGACTTTTGGGATAGGAGGCTCATCTacaaagaacaagaaaacatgtagagaaaaacaaatgattaatgTACAGTTTATGAACAGAAGCCTTCACATAGATGATACATAGATCATCATCATactaaacattttacttttttgttttattttaccatgCATCTGAAAATAGCTGATGCCAgaaaattttattttgtaaaggtaACATGGgattaaagttgtatttaatagtAAACTACCATTAGTTTTGAGCACTGATACACAGTTAAGCAATTCAGTGCGTCAGGCCTGCCTACTCAAAACTAgccttttcttatttgtttttgcaaatatactCAATATAAGATAATGGAGCTGTGGAAACTAGATGACTGAAGCCAGCTTGGCCAACTGCACACTGCTCTGTGGGAAATACCAGCCCAGGGCTGATTGGGAGCGAGATTACGTGGTGAAGTTTggagttttgaaagagaaaagcaagaaagaagaaCGAGAGTGTAAATACTATTTGTAAACGCATATTTAATTATGGCCGAAAGCATACAGTGCAGCTTCAGCCATGCTGTACATTGTGGCAAGAAGACGTGTCGACTCCGGGTTTGTtgcagaaattaatgaaaacaatactagtttcagtattggactttgcaaaaatatatttgtccaacatATTCGCATATTTATTCAAAACCTGGACTTTAATATTTGTGCGATATCTAACACTGATAGTCTTGCATTGTTTAATGTgtccatgtatttatacaaaactaaaacaaaaaacaacattgtatacttttctttgctaaaactatttttgttacattgaatcaGGGGTAGGCATGAATCTGGAAGGCACGCTATAAGTAATGGTATGGTACaatgatataaataaagaaatcacagtatatttcttaaaagataatttatcacttactttgtaaaaaaaaatatggcaACAAGCCTTAAATACCCAGTCACTTTGTCAACTAACATCCTGAGTAAGTTTGTAAATCAAAATTCTCTATTTAAATCAAGCagatttaacaaataaaatgttccattataatgactggcgaTTATACAGTTAATAACACTTGAAGCAatgacatttcgaactacctagAATGGGTATCctcagtgtattcaggaacacagaggaAAACTGGCGCTTCTCTggctctcctctcctgtccaaCAACTATCTGCGGTTCAAGGTTCTCAGTGACATCATAGATGTTGTCATGTGACTCCTTcttgctctctgattggatacTTGTCCAGGGCGATTTCATGAAAATAAGACCCTGCTCTATTGCTTGAAATCGGATGAAATCACAAGAGATCGTATTTCACTATGAAATTTTGATGAAATCAAGGAAATCATGTGCTGCATTTGGATTGCATGCAATCAGAAATTTCAGTGTATCATGGCCTTAAGGTCCAGTTAGAGCCATCTTTGTCTGGACTATATGGCCAAGACTGAAAACAGTGCTGTCTGGaatatagggcccagactggaacAAGTCCTCTATGGGCTACAGGCCCCAGAATGGGGAGAGCGATGTGTTGACTACAGGACAATGATTGAACCCTAGTGAAACCACTTAGTAGCCATTGTTCTCTTGAACTTCATTCTGCATTGCtgtcacttaaaacaaaaaaataatttctgtataAGGGAGATGTTAGGCCAGATGCTCAttaatctataaaaaaaaaaaaatctcttctcCTCGGAACTGTCCCCATTAGTTACAGGGAGCACACTCTTTCCTCATGTACTTTCTATATCCCTACTGACTCAAGTGCAGTAGGCcttaacaattaacaataattgTACTTTACCAGCCCTGGACAGGCAAGTAAGCATCATTGGTATCTGTTGAATTACTCTGAAACCccCAGCACTGCACAGGGGGGCACACATTGCCATCTGTGGCATTGCTCTGAAAcccaTTCTAGCTCTAGGTATATTCCTGCGCTGTAGAGGTCCCTGCACGGGCTCCTTGCTGTCTTTGTTGACACCGATGAAGGCAGTGTGAGAACAGCTCACTCCAGACTGAGTGCTCAGCTCAATCACTTTCTTCTTCAGTGCCTTCTTCTCTTCTTCCCCCTCTTTTGCCCTCTCTTCCCCCTCCAGGGAGCGGATCAGAGTGCGCGCCCCCAGTCTGTGGATCGTCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11973 True 2263 lncRNA 0.52 3 55578276 55584995

Neighbor

gene id symbol gene type direction distance location
AMCG00004637 NA coding downstream 115550 55460253 ~ 55462726 (-)
AMCG00004629 NA coding downstream 242043 55314396 ~ 55336233 (-)
AMCG00004631 NA coding downstream 264505 55311400 ~ 55313771 (-)
AMCG00004630 NA coding downstream 285252 55272343 ~ 55293024 (-)
AMCG00004633 NA coding downstream 308115 55224835 ~ 55270161 (-)
AMCG00004641 NA coding upstream 29617 55614612 ~ 55628983 (-)
AMCG00004648 NA coding upstream 97457 55682452 ~ 55684986 (-)
AMCG00004654 NA coding upstream 283652 55868647 ~ 55870960 (-)
AMCG00004663 NA coding upstream 508114 56093109 ~ 56096391 (-)
AMCG00004664 NA coding upstream 528410 56113405 ~ 56115924 (-)
G9643 NA non-coding downstream 18968 55553824 ~ 55559308 (-)
G9593 NA non-coding downstream 220643 55346783 ~ 55357633 (-)
G9570 NA non-coding downstream 314989 55262925 ~ 55263287 (-)
G9533 NA non-coding downstream 461782 55114342 ~ 55116494 (-)
G9523 NA non-coding downstream 503901 55074046 ~ 55074375 (-)
G9650 NA non-coding upstream 53 55585048 ~ 55605575 (-)
G9661 NA non-coding upstream 21932 55606927 ~ 55607416 (-)
G9698 NA non-coding upstream 133142 55718137 ~ 55718729 (-)
G9700 NA non-coding upstream 134969 55719964 ~ 55720217 (-)
G9701 NA non-coding upstream 136711 55721706 ~ 55722013 (-)
AMCG00004640 NA other downstream 27051 55529650 ~ 55551225 (-)
G9604 NA other downstream 158218 55367585 ~ 55420058 (-)
G9608 NA other downstream 189337 55382216 ~ 55388939 (-)
AMCG00004618 dscaml1,LOC107592669,LOC107699174,LOC107728164,LOC107699210,LOC107566081 other downstream 658338 54915584 ~ 54919938 (-)
G9414 NA other downstream 958221 54576640 ~ 54620055 (-)
AMCG00004649 NA other upstream 152570 55737565 ~ 55743297 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other upstream 229407 55814402 ~ 55846171 (-)
AMCG00004652 NA other upstream 304987 55889982 ~ 55894086 (-)
AMCG00004660 LOC106605085 other upstream 421056 56006051 ~ 56008866 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other upstream 521718 56106713 ~ 56109085 (-)

Expression


Co-expression Network