G10061


Basic Information

Item Value
gene id G10061
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56353928 ~ 56354406 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12521
actgactgactgggcactacagcacattaacactgactgactgactggacaatacagcacattaacactgactgactggacactacagcacattaacactgactgactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactgactggacactacagtacattaacactgattgactgactggacactacagtacattaacactgactgactgactggacactacagtacattaacactgactgactggatactccagcacattaaca
>TU12522
actgactgactgggcactacagcacattaacactgactgactgactggacaatacagcacattaacactgactgactggacactacagcacattaacactgactgactgactgactggacactacagcacattaacactgactgactgactggacactgcagcacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactgactggacactacagtacattaacactgattgactgactggacactacagtacattaacactgactgactgactggacactacagtacattaacactgactgactggatactccagcacattaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12521 True 374 lncRNA 0.49 2 56353928 56354406
TU12522 False 374 lncRNA 0.50 2 56353928 56354406

Neighbor

gene id symbol gene type direction distance location
AMCG00004671 NA coding downstream 141064 56185217 ~ 56212864 (-)
AMCG00004662 NA coding downstream 191597 56147487 ~ 56162331 (-)
AMCG00004664 NA coding downstream 238004 56113405 ~ 56115924 (-)
AMCG00004663 NA coding downstream 257537 56093109 ~ 56096391 (-)
AMCG00004654 NA coding downstream 482968 55868647 ~ 55870960 (-)
AMCG00004674 NA coding upstream 47055 56401461 ~ 56409291 (-)
AMCG00004677 NA coding upstream 56579 56410985 ~ 56414424 (-)
AMCG00004678 NA coding upstream 62650 56417056 ~ 56422906 (-)
AMCG00004676 NA coding upstream 70182 56424588 ~ 56442956 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding upstream 140250 56494656 ~ 56511693 (-)
G10034 NA non-coding downstream 223370 56129442 ~ 56130558 (-)
G10007 NA non-coding downstream 285066 56066549 ~ 56068862 (-)
G9794 NA non-coding downstream 317979 56033498 ~ 56035949 (-)
G9751 NA non-coding downstream 455866 55897856 ~ 55898062 (-)
G9719 NA non-coding downstream 573321 55779425 ~ 55780607 (-)
G10067 NA non-coding upstream 116116 56470522 ~ 56471426 (-)
G10068 NA non-coding upstream 135162 56489568 ~ 56491763 (-)
G10073 NA non-coding upstream 161095 56515501 ~ 56516414 (-)
G10082 NA non-coding upstream 174210 56528616 ~ 57019807 (-)
G10093 NA non-coding upstream 252015 56606421 ~ 56647806 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 244843 56106713 ~ 56109085 (-)
AMCG00004660 LOC106605085 other downstream 345062 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 459842 55889982 ~ 55894086 (-)
AMCG00004653 znf384l,LOC108433737,LOC107665159,LOC106605395 other downstream 507757 55814402 ~ 55846171 (-)
AMCG00004649 NA other downstream 610631 55737565 ~ 55743297 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other upstream 96383 56450789 ~ 56484848 (-)
AMCG00004685 NA other upstream 258621 56613027 ~ 56752935 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other upstream 331331 56685737 ~ 56690492 (-)
AMCG00004690 NA other upstream 336313 56690719 ~ 56691706 (-)
G10115 NA other upstream 393385 56747791 ~ 56750963 (-)

Expression


Co-expression Network