G10082


Basic Information

Item Value
gene id G10082
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56528616 ~ 57019807 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12554
tacagtacattaacactgactgactggacactacaggacattaacactgactgactggacactacagtacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactggacactacagcacattaacactgactggacactacagcacattaacactgactgactgagactCTCACTCACTTTGCTTGTCAGTGAGGGAGCAGTTTCTGCCCAGTGCCTTGAACTCTTTACACAGGGAAGAATATCGTGTCTCCAGGTctgagatctggaggattagggTGGGGTCTCCCTGCCCGTCGGTACACTGCCTGCTTACATTCGGACACGGGGGGGTGGGCTCCTGTCTTCCAGACACTTGGAGACTGTTGGCGGGGGGAAGGATAGGTCTCTTCCCCTTGAGACTGTCATCATTGTACTCATGCAGAGAGGTGTAGTTATCCGATTCATCCATcaCTGTGTCTGTAGTATCACGTCTGCAGATGAGCTGTAATGTGAATAATTATACTCTCTCTTTGTATTCTTTCAACTAGttgctctctctccttcctttcctctctttctttttctctctctaatgcTGGCTCATTTGTCCTCccttgctgtctctctctgtccctgctGTTTCACTGGATAAGGTTCAAAGCGTGTCTCTCTGTACTTTGTCACTCTAACCTCTCTCGCTCTGTTTGCTATTTATCAGCATGGGGTGCAGAGGGTGTGGGGAAGAAGAAAGTACAGAATGAACCAACACAGAGAgaatgggagagggagagggaaagggagagagatagggagggagagagggagagagggagaaagggaaagggagagagattaATTGAGAAATGGAGTgttgaaacactgactgactggacaccaCGGTCCATTAACACAACAcgtggaggaggagagggagagattgggAATCTGACGCAATAAGTGAATAACACAAAACTGGACATGCcgaaattgtgaaatatgtACACTTCCTCtatctctgactctctctctctgattgcaTAATGTTTTGAGTGCACCTGAAACAACAATATCCTCTGCTTCACACTGAGGGGGGTACACACACTGCCtggctgactggacactacagtacattaacactgactgactgactggacactacagtacattaacactgactgactagacactacagtacattaacactgactgactgactggacactacagcacataaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattac
>TU12555
gggaggtgtgAGTGTCCAAAGTAGATATTTACAGATTCAATATTCAAGAAACACTAAAGGAGAGAGAGCATACACTGAGTACATTAACACTACtacacacaacagcacattcacactgactgactggacactacagcactttaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagcacattaacactgactgactggacactacagcacattaacactgactgactgactggacactacagtacattaacactgactgactggacactacagcacattaacactgact

Function

GO: NA

KEGG:

id description
ko00100 Steroid biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU12554 True 1418 lncRNA 0.39 6 56528616 56733600
TU12555 False 381 lncRNA 0.43 2 57019295 57019807

Neighbor

gene id symbol gene type direction distance location
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding downstream 16923 56494656 ~ 56511693 (-)
AMCG00004676 NA coding downstream 85660 56424588 ~ 56442956 (-)
AMCG00004678 NA coding downstream 105710 56417056 ~ 56422906 (-)
AMCG00004677 NA coding downstream 114192 56410985 ~ 56414424 (-)
AMCG00004674 NA coding downstream 119325 56401461 ~ 56409291 (-)
AMCG00004705 NA coding upstream 17680 57037487 ~ 57050034 (-)
G10073 NA non-coding downstream 12202 56515501 ~ 56516414 (-)
G10068 NA non-coding downstream 36853 56489568 ~ 56491763 (-)
G10067 NA non-coding downstream 57190 56470522 ~ 56471426 (-)
G10061 NA non-coding downstream 174210 56353928 ~ 56354406 (-)
G10034 NA non-coding downstream 398058 56129442 ~ 56130558 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other downstream 43768 56450789 ~ 56484848 (-)
AMCG00004672 NA other downstream 143746 56283994 ~ 56384870 (-)
AMCG00004665 p3h3,LOC106605089,LOC106583419 other downstream 419531 56106713 ~ 56109085 (-)
AMCG00004660 LOC106605085 other downstream 519750 56006051 ~ 56008866 (-)
AMCG00004652 NA other downstream 634530 55889982 ~ 55894086 (-)
G10157 NA other upstream 5730 57025537 ~ 57028915 (-)

Expression


Co-expression Network