G10116


Basic Information

Item Value
gene id G10116
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56753025 ~ 56754391 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12598
gttaatgtactgtggtgtccagtcagtcagtcagagtgtGTACACtgtattaatctctctctctcttagatTTCAGTCTGGTCTATGTGTCACTCATTCTGGTGTTGTTAGGAATTCTGGGAATATTCATACTGTTCAAGAACTGCAGTGATTCACTTTGTATTAAGAAAgtggcTAAGCTTTGTGTGCCTGACAATCAAAAGGTCAATACTGGAATTGCAGTCCTGCCTTACTGGCAGCCAGGCCACCAACTCCTGTCCAGTAGGGAGCCCCAGATCGCAGAGTCATACACCAATCACAGCCCAGAGAGAAGCCTGGAGACGGACTGCCCCCAGACCCGAAGCCCGGTGGGGGACTGGTGGAGGGGAGCCAATCAGAGTGCAGAGAGGAGCAGCCAGCCCATCAGTAGGAGCTCTGAGGACACTAAGTGCAGTGGGAACTTAggt

Function

NR:

description
PREDICTED: protein Ycf2-like

GO:

id name namespace
GO:0050900 leukocyte migration biological_process
GO:0030595 leukocyte chemotaxis biological_process
GO:0060326 cell chemotaxis biological_process

KEGG:

id description
ko04660 T cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU12598 True 446 lncRNA 0.50 3 56753025 56754391

Neighbor

gene id symbol gene type direction distance location
AMCG00004689 NA coding downstream 14776 56735843 ~ 56738249 (-)
AMCG00004693 NA coding downstream 47211 56705344 ~ 56705814 (-)
AMCG00004691 NA coding downstream 50512 56698321 ~ 56702513 (-)
AMCG00004684 NA coding downstream 97940 56653182 ~ 56655085 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding downstream 241332 56494656 ~ 56511693 (-)
AMCG00004698 NA coding upstream 70630 56825021 ~ 56836934 (-)
AMCG00004699 NA coding upstream 92292 56846683 ~ 56853046 (-)
AMCG00004697 NA coding upstream 101965 56856356 ~ 56858606 (-)
AMCG00004704 NA coding upstream 143212 56897603 ~ 56910267 (-)
AMCG00004706 NA coding upstream 179006 56933397 ~ 56956495 (-)
G10108 NA non-coding downstream 38837 56712389 ~ 56714188 (-)
G10093 NA non-coding downstream 105219 56606421 ~ 56647806 (-)
G10073 NA non-coding downstream 236611 56515501 ~ 56516414 (-)
G10068 NA non-coding downstream 261262 56489568 ~ 56491763 (-)
G10067 NA non-coding downstream 281599 56470522 ~ 56471426 (-)
G10084 NA non-coding upstream 7654 56762045 ~ 56820786 (-)
G10135 NA non-coding upstream 105946 56860337 ~ 56861643 (-)
AMCG00004685 NA other downstream 90 56613027 ~ 56752935 (-)
G10115 NA other downstream 2062 56747791 ~ 56750963 (-)
AMCG00004690 NA other downstream 61319 56690719 ~ 56691706 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other downstream 62533 56685737 ~ 56690492 (-)
AMCG00004675 chd4,LOC107724784,LOC107671917,LOC107714608,LOC107704911 other downstream 268177 56450789 ~ 56484848 (-)
G10079 NA other upstream 18111 56772502 ~ 56775440 (-)
G10121 NA other upstream 22735 56777126 ~ 56778469 (-)
G10123 NA other upstream 34361 56788752 ~ 56792161 (-)
G10157 NA other upstream 271146 57025537 ~ 57028915 (-)

Expression


Co-expression Network