G10121


Basic Information

Item Value
gene id G10121
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 56777126 ~ 56778469 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU12606
NNNNGGGGACATGATTGGATGGGGAGGTGGTCAGAGGTCACGTTTACTCCTTGGAGGCCATGTACACAATCAGGTCGACCACTCGGGTGCTGTAGCCAAACTCGTTGTCGTGTGACGAGTTTGACAAAGTGGTCATTGAGGGCGATGCCGGCTCCAGCATCAAAGATTGAGGAGTGCGTGTCGCCATTGAAGTCAGCAGAGACAAACCTGGTCCTCTGTGTATCCCAGGATGCCCTTCATGGGTCCTTCAGAGGCCGCCTTCACTGCAGCCTTGATGTCATCATACTTGGCCTGAGTAAAACAAGATTTTGTTGCTGTAGGTTTACCGGTCTGTAAAGCACTCAGTGGCTACCCTGCTAAGGGCGATATACAAATGGTTTGATTAATAGAAGCCACATGTCCCCCTAACAAGGTGGCACTGGATCCCCACTGGGGGACACTGGTAGGATGTGGCCCCAGAGCAGCAGGTCCTCCCTGTGCAACACAGCCAGGCCCTTGGGGTCCATGGACAGGGTCAACAGCCATGCAAGAGGGCCCAACAGGACCAATCTAGAAGTGTAGCTCCGGCCACTCAGATCCAAAGGCCAAACCCAATGTGTTCTGCAACGAAGCAATTGGACCAGGGCGACTCACCGCTTTCTCCAGGCGGCAGGTTAGGTCAACCACGGACACGTTGGGGGTGGGCACTCTGAACGCCATGCCCGTCAGCTTCCTGTGAGGAGAGAGCGATTAGACTGAACACTCCAGTGCATGGACTGGTCCAATACCCGACCCATCACCCTGCTCTACGGCACCCCCAGCCTGGTTCTGACCCGTTCAACTCGGGGATGACTTTGCCCACAGCCTTGGCGGCGCCGGTGGAGGCGGGGATGATGTTCTGGTGCGCGCCACGCCCATCCCTCCACAGCTTCCCTGATGGCCCGTCCACGGTCTTCTGGGTGGCAGTGTAGGCGTGCACTGTGGTCTGGGGAGAGAGGCCACATTACCCAGCAGCCCTG
>TU12607
NNNNGGGGACATGATTGGATGGGGAGGTGGTCAGAGGTCACGTTTACTCCTTGGAGGCCATGTACACAATCAGGTCGACCACTCGGGTGCTGTAGCCAAACTCGTTGTCGTGTGACGAGTTTGACAAAGTGGTCATTGAGGGCGATGCCGGCTCCAGCATCAAAGATTGAGGAGTGCGTGTCGCCATTGAAGTCAGCAGAGACAACCTGGGGGAGAGAAGACTGTTGGAGCACTGTGCAGATTGAATGTTTCCCCATGATCCTCTACCCTGGAAAAAGCCATCTACGGGGTGCGTTGTGTGAAGTACTGTCCAGTGGGTGGATATGGCACTACATTAACAACTGGCCACAACAGTACACAGATGCTAGGTCCCCCCCACCGTTCGACCCCATGAAGCAGTGTGCAGTCAGGCACTGACCTGGTCCTCTGTGTATCCCAGGATGCCCTTCATGGGTCCTTCAGAGGCCGCCTTCACTGCAGCCTTGATGTCATCATACTTGGCCTGAGTAAAACAAGATTTTGTTGCTGTAGGTTTACCGGTCTGTAAAGCACTCAGTGGCTACCCTGCTAAGGGCGATATACAAATGGTTTGATTAATAGAAGCCACATGTCCCCCTAACAAGGTGGCACTGGATCCCCACTGGGGGACACTGGTAGGATGTGGCCCCAGAGCAGCAGGTCCTCCCTGTGCAACACAGCCAGGCCCTTGGGGTCCATGGACAGGGTCAACAGCCATGCAAGAGGGCCCAACAGGACCAATCTAGAAGTGTAGCTCCGGCCACTCAGATCCAAAGGCCAAACCCAATGTGTTCTGCAACGAAGCAATTGGACCAGGGCGACTCACCGCTTTCTCCAGGCGGCAGGTTAGGTCAACCACGGACACGTTGGGGGTGGGCACTCTGAACGCCATGCCCGTCAGCTCCCGTTCAACTCGGGGATGACTTTGCCCACAGCCTTGGCGGCGCCGGTGGAGGCGGGGATGATGTTCTGGTGCGCGCCACGCCCATCCCTCCACAGCTTCCCTGATGGCCCGTCCACGGTCTTCTGGGTGGCAGTGTAGGCGTGCACTGTGGTCTGGGGAGAGAGGCCACATTACCCAGCAGCCCTG

Function

NR:

description
PREDICTED: urotensin-2 receptor-like

GO:

id name namespace
GO:0009123 nucleoside monophosphate metabolic process biological_process
GO:0009124 nucleoside monophosphate biosynthetic process biological_process
GO:0009126 purine nucleoside monophosphate metabolic process biological_process
GO:0009127 purine nucleoside monophosphate biosynthetic process biological_process
GO:0009156 ribonucleoside monophosphate biosynthetic process biological_process
GO:0009161 ribonucleoside monophosphate metabolic process biological_process
GO:0009167 purine ribonucleoside monophosphate metabolic process biological_process
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process
GO:1990351 transporter complex cellular_component
GO:0034702 ion channel complex cellular_component
GO:0034703 cation channel complex cellular_component
GO:0034704 calcium channel complex cellular_component
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:1902495 transmembrane transporter complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU12606 False 998 lncRNA 0.57 3 56777126 56778469
TU12607 True 1108 TUCP 0.56 3 56777126 56778469

Neighbor

gene id symbol gene type direction distance location
AMCG00004689 NA coding downstream 38877 56735843 ~ 56738249 (-)
AMCG00004693 NA coding downstream 71312 56705344 ~ 56705814 (-)
AMCG00004691 NA coding downstream 74613 56698321 ~ 56702513 (-)
AMCG00004684 NA coding downstream 122041 56653182 ~ 56655085 (-)
AMCG00004682 cdc42l,LOC108433756,LOC108272678,LOC107552852,LOC105025850,LOC103039613 coding downstream 265433 56494656 ~ 56511693 (-)
AMCG00004698 NA coding upstream 46552 56825021 ~ 56836934 (-)
AMCG00004699 NA coding upstream 68214 56846683 ~ 56853046 (-)
AMCG00004697 NA coding upstream 77887 56856356 ~ 56858606 (-)
AMCG00004704 NA coding upstream 119134 56897603 ~ 56910267 (-)
AMCG00004706 NA coding upstream 154928 56933397 ~ 56956495 (-)
G10116 NA non-coding downstream 22735 56753025 ~ 56754391 (-)
G10108 NA non-coding downstream 62938 56712389 ~ 56714188 (-)
G10093 NA non-coding downstream 129320 56606421 ~ 56647806 (-)
G10073 NA non-coding downstream 260712 56515501 ~ 56516414 (-)
G10068 NA non-coding downstream 285363 56489568 ~ 56491763 (-)
G10135 NA non-coding upstream 81868 56860337 ~ 56861643 (-)
G10079 NA other downstream 1686 56772502 ~ 56775440 (-)
AMCG00004685 NA other downstream 24191 56613027 ~ 56752935 (-)
G10115 NA other downstream 26163 56747791 ~ 56750963 (-)
AMCG00004690 NA other downstream 85420 56690719 ~ 56691706 (-)
AMCG00004692 LOC103030083,LOC107394826,LOC101069563,LOC101467164,LOC101164413,LOC106519597,LOC108443584 other downstream 86634 56685737 ~ 56690492 (-)
G10123 NA other upstream 10283 56788752 ~ 56792161 (-)
G10157 NA other upstream 247068 57025537 ~ 57028915 (-)

Expression


Co-expression Network