G1253


Basic Information

Item Value
gene id G1253
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 7796451 ~ 7796854 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU1479
tacatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacatggcattgattcaacaaggtgttgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgattgAGATtcgtgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggggccagtttagtacagtgaactcattgtcatgttcaagaaaccaatttcaaatgattcgaccttgtgacatggtgcattatcctgctggaattagccatcagaggatgggtacttggtggtcataaagggatggacatggtca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1479 True 404 lncRNA 0.51 1 7796451 7796854

Neighbor

gene id symbol gene type direction distance location
AMCG00003526 NA coding upstream 248897 7532553 ~ 7547554 (+)
AMCG00003525 NA coding upstream 265326 7518051 ~ 7531125 (+)
AMCG00003521 NA coding upstream 282041 7505463 ~ 7514410 (+)
AMCG00003527 NA coding upstream 314245 7466921 ~ 7482206 (+)
AMCG00003529 NA coding upstream 336975 7453411 ~ 7459476 (+)
AMCG00003530 LOC108258189,LOC103368564,LOC106533618 coding downstream 181921 7978775 ~ 7980197 (+)
AMCG00003532 rsad2 coding downstream 487973 8284827 ~ 8292218 (+)
AMCG00003533 rnf144a,rnf144aa,LOC107752753,LOC106610698 coding downstream 520184 8317038 ~ 8337650 (+)
AMCG00003535 NA coding downstream 1022558 8819412 ~ 8842419 (+)
AMCG00003542 itgb1bp1 coding downstream 1161287 8958141 ~ 8959534 (+)
G1241 NA non-coding upstream 45986 7523861 ~ 7750465 (+)
G1242 NA non-coding upstream 267993 7526859 ~ 7528458 (+)
G1218 NA non-coding upstream 306570 7489445 ~ 7489881 (+)
G1187 NA non-coding upstream 430974 7364944 ~ 7365477 (+)
G1146 NA non-coding upstream 722842 7073404 ~ 7073609 (+)
G1271 NA non-coding downstream 478908 8275762 ~ 8276983 (+)
G1291 NA non-coding downstream 543412 8340266 ~ 8340592 (+)
G1303 NA non-coding downstream 646886 8443740 ~ 8444024 (+)
G1343 NA non-coding downstream 864178 8661032 ~ 8666927 (+)
G1347 NA non-coding downstream 902612 8699466 ~ 8700554 (+)
AMCG00003524 rps7,LOC107668222 other upstream 292436 7498040 ~ 7504015 (+)
G1012 NA other upstream 1301546 6487692 ~ 6494905 (+)
AMCG00003480 NA other upstream 2461699 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 3274051 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 3341309 4452564 ~ 4455142 (+)
AMCG00003534 id2,LOC106566577 other downstream 852271 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 1103602 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 1279036 9075890 ~ 9106765 (+)
AMCG00003551 NA other downstream 1458974 9255828 ~ 9263468 (+)
AMCG00003570 NA other downstream 1980654 9777508 ~ 9781756 (+)

Expression


Co-expression Network