Gene
RNA
| Item | Value |
|---|---|
| gene id | G1254 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 7796450 ~ 7796858 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1480 | True | 409 | lncRNA | 0.51 | 1 | 7796450 | 7796858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003528 | NA | coding | downstream | 298358 | 7489697 ~ 7498092 (-) |
| AMCG00003519 | adi1,LOC102789913 | coding | downstream | 349577 | 7421056 ~ 7446873 (-) |
| AMCG00003520 | tssc1 | coding | downstream | 388836 | 7381098 ~ 7407614 (-) |
| AMCG00003518 | NA | coding | downstream | 568932 | 7221488 ~ 7227518 (-) |
| AMCG00003517 | NA | coding | downstream | 587482 | 7167827 ~ 7208968 (-) |
| AMCG00003531 | NA | coding | upstream | 482038 | 8278896 ~ 8283744 (-) |
| AMCG00003536 | NA | coding | upstream | 856900 | 8653758 ~ 8672876 (-) |
| AMCG00003538 | LOC106571256,LOC107668217,LOC107693235,LOC107549106 | coding | upstream | 889188 | 8686046 ~ 8706309 (-) |
| AMCG00003537 | NA | coding | upstream | 924386 | 8721244 ~ 8751203 (-) |
| AMCG00003549 | NA | coding | upstream | 1190247 | 8987105 ~ 9005791 (-) |
| G1252 | NA | non-coding | downstream | 7536 | 7788673 ~ 7788914 (-) |
| G1228 | NA | non-coding | downstream | 292262 | 7499433 ~ 7504188 (-) |
| G1238 | NA | non-coding | downstream | 304970 | 7491281 ~ 7491480 (-) |
| G1196 | NA | non-coding | downstream | 431173 | 7364967 ~ 7365277 (-) |
| G1147 | NA | non-coding | downstream | 722836 | 7073401 ~ 7073614 (-) |
| G1268 | sox11,LOC106958914,LOC103147284 | non-coding | upstream | 179922 | 7976780 ~ 8054337 (-) |
| G1281 | LOC107655310,LOC107707684,LOC107553276 | non-coding | upstream | 491977 | 8288835 ~ 8289762 (-) |
| G1283 | NA | non-coding | upstream | 494860 | 8291718 ~ 8292212 (-) |
| G1363 | NA | non-coding | upstream | 853165 | 8650023 ~ 8669831 (-) |
| G1374 | NA | non-coding | upstream | 1044620 | 8841478 ~ 8841755 (-) |
| AMCG00003484 | NA | other | downstream | 2439982 | 5344070 ~ 5356468 (-) |
| AMCG00003476 | NA | other | downstream | 2987461 | 4583142 ~ 4808989 (-) |
| AMCG00003459 | NA | other | downstream | 3900926 | 3876232 ~ 3895524 (-) |
| AMCG00003444 | NA | other | downstream | 4257483 | 3536172 ~ 3538967 (-) |
| G531 | adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 | other | downstream | 4366178 | 3394657 ~ 3430272 (-) |
| AMCG00003550 | NA | other | upstream | 1212259 | 9009117 ~ 9082850 (-) |
| AMCG00003572 | NA | other | upstream | 2056341 | 9853199 ~ 9865649 (-) |
| AMCG00003573 | NA | other | upstream | 2077812 | 9874670 ~ 9878444 (-) |
| AMCG00003587 | naa20 | other | upstream | 2828488 | 10625346 ~ 10633112 (-) |
| AMCG00003586 | NA | other | upstream | 3154226 | 10951084 ~ 10956353 (-) |
