Gene
RNA
| Item | Value |
|---|---|
| gene id | G1375 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 8843827 ~ 8844082 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1613 | True | 256 | lncRNA | 0.45 | 1 | 8843827 | 8844082 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003535 | NA | coding | upstream | 1408 | 8819412 ~ 8842419 (+) |
| AMCG00003533 | rnf144a,rnf144aa,LOC107752753,LOC106610698 | coding | upstream | 506177 | 8317038 ~ 8337650 (+) |
| AMCG00003532 | rsad2 | coding | upstream | 551609 | 8284827 ~ 8292218 (+) |
| AMCG00003530 | LOC108258189,LOC103368564,LOC106533618 | coding | upstream | 863630 | 7978775 ~ 7980197 (+) |
| AMCG00003526 | NA | coding | upstream | 1296273 | 7532553 ~ 7547554 (+) |
| AMCG00003542 | itgb1bp1 | coding | downstream | 114059 | 8958141 ~ 8959534 (+) |
| AMCG00003539 | cpsf3 | coding | downstream | 121629 | 8965711 ~ 8977843 (+) |
| AMCG00003540 | NA | coding | downstream | 135518 | 8979600 ~ 8982021 (+) |
| AMCG00003545 | grhl1 | coding | downstream | 265759 | 9109841 ~ 9131160 (+) |
| AMCG00003543 | NA | coding | downstream | 296462 | 9140544 ~ 9144958 (+) |
| G1347 | NA | non-coding | upstream | 143273 | 8699466 ~ 8700554 (+) |
| G1343 | NA | non-coding | upstream | 176900 | 8661032 ~ 8666927 (+) |
| G1303 | NA | non-coding | upstream | 399803 | 8443740 ~ 8444024 (+) |
| G1291 | NA | non-coding | upstream | 503235 | 8340266 ~ 8340592 (+) |
| G1271 | NA | non-coding | upstream | 566844 | 8275762 ~ 8276983 (+) |
| G1430 | ywhaqb,ywhaq,LOC105896734,LOC108436740,LOC107733143,LOC107674035,LOC107752793 | non-coding | downstream | 165215 | 9009297 ~ 9027632 (+) |
| G1574 | NA | non-coding | downstream | 856475 | 9700557 ~ 9703478 (+) |
| G1706 | NA | non-coding | downstream | 1392774 | 10236856 ~ 10238261 (+) |
| G1747 | ralgapa2 | non-coding | downstream | 1587582 | 10431664 ~ 10457765 (+) |
| G1855 | NA | non-coding | downstream | 2206069 | 11050151 ~ 11050644 (+) |
| AMCG00003534 | id2,LOC106566577 | other | upstream | 191357 | 8649125 ~ 8652470 (+) |
| AMCG00003524 | rps7,LOC107668222 | other | upstream | 1339812 | 7498040 ~ 7504015 (+) |
| G1012 | NA | other | upstream | 2348922 | 6487692 ~ 6494905 (+) |
| AMCG00003480 | NA | other | upstream | 3509075 | 5303450 ~ 5334752 (+) |
| AMCG00003469 | NA | other | upstream | 4321427 | 4514031 ~ 4522400 (+) |
| AMCG00003541 | asap2,LOC106566627 | other | downstream | 56374 | 8900456 ~ 8941751 (+) |
| AMCG00003544 | NA | other | downstream | 231808 | 9075890 ~ 9106765 (+) |
| AMCG00003551 | NA | other | downstream | 411746 | 9255828 ~ 9263468 (+) |
| AMCG00003570 | NA | other | downstream | 933426 | 9777508 ~ 9781756 (+) |
| AMCG00003604 | NA | other | downstream | 2617581 | 11461663 ~ 11482931 (+) |
