Gene
RNA
| Item | Value |
|---|---|
| gene id | G1381 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 8852197 ~ 8852441 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1619 | True | 245 | lncRNA | 0.48 | 1 | 8852197 | 8852441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003537 | NA | coding | downstream | 100994 | 8721244 ~ 8751203 (-) |
| AMCG00003538 | LOC106571256,LOC107668217,LOC107693235,LOC107549106 | coding | downstream | 145888 | 8686046 ~ 8706309 (-) |
| AMCG00003536 | NA | coding | downstream | 179321 | 8653758 ~ 8672876 (-) |
| AMCG00003531 | NA | coding | downstream | 568453 | 8278896 ~ 8283744 (-) |
| AMCG00003528 | NA | coding | downstream | 1354105 | 7489697 ~ 7498092 (-) |
| AMCG00003549 | NA | coding | upstream | 134664 | 8987105 ~ 9005791 (-) |
| AMCG00003548 | NA | coding | upstream | 299443 | 9151884 ~ 9155291 (-) |
| AMCG00003553 | zdhhc14,LOC106574720 | coding | upstream | 329660 | 9182101 ~ 9207165 (-) |
| AMCG00003552 | zdhhc14,LOC106610784 | coding | upstream | 401413 | 9253854 ~ 9254096 (-) |
| AMCG00003554 | NA | coding | upstream | 416062 | 9268503 ~ 9312491 (-) |
| G1374 | NA | non-coding | downstream | 10442 | 8841478 ~ 8841755 (-) |
| G1363 | NA | non-coding | downstream | 182366 | 8650023 ~ 8669831 (-) |
| G1283 | NA | non-coding | downstream | 559985 | 8291718 ~ 8292212 (-) |
| G1281 | LOC107655310,LOC107707684,LOC107553276 | non-coding | downstream | 562435 | 8288835 ~ 8289762 (-) |
| G1268 | sox11,LOC106958914,LOC103147284 | non-coding | downstream | 797860 | 7976780 ~ 8054337 (-) |
| G1405 | NA | non-coding | upstream | 105086 | 8957527 ~ 8964495 (-) |
| G1415 | cpsf3 | non-coding | upstream | 122369 | 8974810 ~ 8977849 (-) |
| G1492 | NA | non-coding | upstream | 322414 | 9174855 ~ 9179981 (-) |
| G1630 | prkd3,LOC107098152,LOC106607674 | non-coding | upstream | 998250 | 9850691 ~ 9851427 (-) |
| G1631 | NA | non-coding | upstream | 999628 | 9852069 ~ 9852338 (-) |
| AMCG00003484 | NA | other | downstream | 3495729 | 5344070 ~ 5356468 (-) |
| AMCG00003476 | NA | other | downstream | 4043208 | 4583142 ~ 4808989 (-) |
| AMCG00003459 | NA | other | downstream | 4956673 | 3876232 ~ 3895524 (-) |
| AMCG00003444 | NA | other | downstream | 5313230 | 3536172 ~ 3538967 (-) |
| G531 | adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 | other | downstream | 5421925 | 3394657 ~ 3430272 (-) |
| AMCG00003550 | NA | other | upstream | 156676 | 9009117 ~ 9082850 (-) |
| AMCG00003572 | NA | other | upstream | 1000758 | 9853199 ~ 9865649 (-) |
| AMCG00003573 | NA | other | upstream | 1022229 | 9874670 ~ 9878444 (-) |
| AMCG00003587 | naa20 | other | upstream | 1772905 | 10625346 ~ 10633112 (-) |
| AMCG00003586 | NA | other | upstream | 2098643 | 10951084 ~ 10956353 (-) |
