G1405


Basic Information

Item Value
gene id G1405
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 8957527 ~ 8964495 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU1646
GAGGAAGTGAAGTGTCTGTTTGAGTCTCGCCTGAAGACGCACAGACCCGGGGAATGGCTGCAAACTGCGCCCCAGTCCAGCCATAAATTGACAAGTAAAGTTTCTGGCCCTTGCCGGTGGAGCTGAAGTGCTGGCGTCATGGTGAAGAATGTTCCGGAAAGGTAAAAAGCGTcacagcagcagctcctcccaAAGCAGTGAGATCAGCACCAAAAGCAAGTCTACAGACT

Function

NR:

description
UDP glucuronosyltransferase 5 family, polypeptide B1 isoform X1

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0006269 DNA replication, synthesis of RNA primer biological_process
GO:0008094 DNA-dependent ATPase activity molecular_function

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03440 Homologous recombination
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU1646 True 230 lncRNA 0.62 3 8957527 8964495

Neighbor

gene id symbol gene type direction distance location
AMCG00003537 NA coding downstream 206324 8721244 ~ 8751203 (-)
AMCG00003538 LOC106571256,LOC107668217,LOC107693235,LOC107549106 coding downstream 251218 8686046 ~ 8706309 (-)
AMCG00003536 NA coding downstream 284651 8653758 ~ 8672876 (-)
AMCG00003531 NA coding downstream 673783 8278896 ~ 8283744 (-)
AMCG00003528 NA coding downstream 1459435 7489697 ~ 7498092 (-)
AMCG00003549 NA coding upstream 22610 8987105 ~ 9005791 (-)
AMCG00003548 NA coding upstream 187389 9151884 ~ 9155291 (-)
AMCG00003553 zdhhc14,LOC106574720 coding upstream 217606 9182101 ~ 9207165 (-)
AMCG00003552 zdhhc14,LOC106610784 coding upstream 289359 9253854 ~ 9254096 (-)
AMCG00003554 NA coding upstream 304008 9268503 ~ 9312491 (-)
G1381 NA non-coding downstream 105086 8852197 ~ 8852441 (-)
G1374 NA non-coding downstream 115772 8841478 ~ 8841755 (-)
G1363 NA non-coding downstream 287696 8650023 ~ 8669831 (-)
G1283 NA non-coding downstream 665315 8291718 ~ 8292212 (-)
G1281 LOC107655310,LOC107707684,LOC107553276 non-coding downstream 667765 8288835 ~ 8289762 (-)
G1415 cpsf3 non-coding upstream 10315 8974810 ~ 8977849 (-)
G1492 NA non-coding upstream 210360 9174855 ~ 9179981 (-)
G1630 prkd3,LOC107098152,LOC106607674 non-coding upstream 886196 9850691 ~ 9851427 (-)
G1631 NA non-coding upstream 887574 9852069 ~ 9852338 (-)
G1744 NA non-coding upstream 1450443 10414938 ~ 10415887 (-)
AMCG00003484 NA other downstream 3601059 5344070 ~ 5356468 (-)
AMCG00003476 NA other downstream 4148538 4583142 ~ 4808989 (-)
AMCG00003459 NA other downstream 5062003 3876232 ~ 3895524 (-)
AMCG00003444 NA other downstream 5418560 3536172 ~ 3538967 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other downstream 5527255 3394657 ~ 3430272 (-)
AMCG00003550 NA other upstream 44622 9009117 ~ 9082850 (-)
AMCG00003572 NA other upstream 888704 9853199 ~ 9865649 (-)
AMCG00003573 NA other upstream 910175 9874670 ~ 9878444 (-)
AMCG00003587 naa20 other upstream 1660851 10625346 ~ 10633112 (-)
AMCG00003586 NA other upstream 1986589 10951084 ~ 10956353 (-)

Expression


Co-expression Network