G1744


Basic Information

Item Value
gene id G1744
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 10414938 ~ 10415887 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2052
TCACCGGCTGTTGTGATCCCGACCTTTGCACTGGAAGTTGCACATAACTATTtactttgaggaaaaaatagCACGAATATACCGTTTGGAGAACATGGTGTCGCCAGGGCGCGCATGTGCGGCTCCACCAGCTGCGCAGTGGAGAACAGCAGGACATCTGCaagagacggacagacagagagacctAAAGTGGATATGGTCGCACAGTTCACAGCacagaaaattacttttttgtaaaacaaacaaacaaaaaatcatgaataattTGCATTAAAGATAACCCACAACCCTACATCACAattataatagtagtagtagttgtagcagtataaacaaacattcactttatgttttttatgtatgtatgcatctaTGTATTGTAGACAAATTACTTGCCAGATTCTTTGTTAAATTGGTACCACCCATTCTGTCAATATATATcagcaaataaataagtttgtttgttatta

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU2052 True 470 lncRNA 0.40 2 10414938 10415887

Neighbor

gene id symbol gene type direction distance location
AMCG00003579 LOC107197779 coding downstream 23903 10376843 ~ 10391035 (-)
AMCG00003577 NA coding downstream 98099 10278240 ~ 10316839 (-)
AMCG00003578 xrn2,LOC106571262,LOC108229358,LOC104951730 coding downstream 142171 10236749 ~ 10272767 (-)
AMCG00003574 pax1,pax1a,LOC100700371,LOC102791619,LOC107737274,LOC101466677 coding downstream 299832 10108638 ~ 10115106 (-)
AMCG00003563 NA coding downstream 637570 9774896 ~ 9777368 (-)
AMCG00003582 NA coding upstream 163011 10578898 ~ 10580325 (-)
AMCG00003584 NA coding upstream 168773 10584660 ~ 10616997 (-)
AMCG00003589 col12a1,col12a1a,LOC108428624 coding upstream 455454 10871341 ~ 10944875 (-)
AMCG00003588 tmem30ab,LOC107721815,LOC107658180,LOC107597847,LOC107714749,LOC108257743,LOC107664818 coding upstream 541522 10957409 ~ 10963201 (-)
AMCG00003592 NA coding upstream 554477 10970364 ~ 10996825 (-)
G1631 NA non-coding downstream 562600 9852069 ~ 9852338 (-)
G1630 prkd3,LOC107098152,LOC106607674 non-coding downstream 563511 9850691 ~ 9851427 (-)
G1492 NA non-coding downstream 1234957 9174855 ~ 9179981 (-)
G1415 cpsf3 non-coding downstream 1437089 8974810 ~ 8977849 (-)
G1405 NA non-coding downstream 1450443 8957527 ~ 8964495 (-)
G1856 NA non-coding upstream 634264 11050151 ~ 11051078 (-)
G1935 NA non-coding upstream 965985 11381872 ~ 11386054 (-)
G2044 NA non-coding upstream 1316917 11732804 ~ 11863101 (-)
G2052 LOC100846954 non-coding upstream 1443034 11858921 ~ 11905671 (-)
G2066 NA non-coding upstream 1611032 12026919 ~ 12027158 (-)
AMCG00003573 NA other downstream 536494 9874670 ~ 9878444 (-)
AMCG00003572 NA other downstream 549289 9853199 ~ 9865649 (-)
AMCG00003550 NA other downstream 1332088 9009117 ~ 9082850 (-)
AMCG00003484 NA other downstream 5058470 5344070 ~ 5356468 (-)
AMCG00003476 NA other downstream 5605949 4583142 ~ 4808989 (-)
AMCG00003587 naa20 other upstream 209459 10625346 ~ 10633112 (-)
AMCG00003586 NA other upstream 535197 10951084 ~ 10956353 (-)
AMCG00003595 myo6,LOC106571274 other upstream 647234 11063121 ~ 11116905 (-)
AMCG00003618 NA other upstream 1328102 11743989 ~ 11789275 (-)
AMCG00003623 LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 other upstream 1506104 11921991 ~ 11939783 (-)

Expression


Co-expression Network