G2079


Basic Information

Item Value
gene id G2079
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 12068049 ~ 12068258 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2504
atctgggtcagtccatgaggaggagatgcactgcaggacttaatgcagctgggggccacaccagatactgactgttacttttgattttgaccccccctttgttcagggacacattattccatttgtcttagtcacatgtctgtgaaacttgttcagtttatgtcttagatgttgaatctttttatgttcatacaaatatttacacgttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2504 True 210 lncRNA 0.40 1 12068049 12068258

Neighbor

gene id symbol gene type direction distance location
AMCG00003626 rragd,LOC107564985,LOC107693082,LOC107583676,LOC108435430,LOC107755772 coding downstream 91088 11958572 ~ 11976961 (-)
AMCG00003627 ube2j1 coding downstream 110395 11940494 ~ 11957654 (-)
AMCG00003619 LOC108427508,LOC101167911,LOC103355980,LOC108270165 coding downstream 189880 11866722 ~ 11878169 (-)
AMCG00003616 rngtt,LOC107554925,LOC107660510 coding downstream 347309 11707557 ~ 11720740 (-)
AMCG00003617 NA coding downstream 456369 11609163 ~ 11611680 (-)
AMCG00003629 LOC104963585,LOC104944503 coding upstream 11210 12079468 ~ 12130611 (-)
AMCG00003631 NA coding upstream 88109 12156367 ~ 12176632 (-)
AMCG00003632 NA coding upstream 188211 12256469 ~ 12283492 (-)
AMCG00003638 epha7 coding upstream 514879 12583137 ~ 12595386 (-)
AMCG00003635 epha7,LOC107567608 coding upstream 550528 12618786 ~ 12624689 (-)
G2071 NA non-coding downstream 16558 12051245 ~ 12051491 (-)
G2066 NA non-coding downstream 40891 12026919 ~ 12027158 (-)
G2052 LOC100846954 non-coding downstream 162378 11858921 ~ 11905671 (-)
G2044 NA non-coding downstream 204948 11732804 ~ 11863101 (-)
G1935 NA non-coding downstream 681995 11381872 ~ 11386054 (-)
G2140 NA non-coding upstream 319350 12387608 ~ 12387931 (-)
G2142 NA non-coding upstream 349670 12417928 ~ 12418336 (-)
G2168 NA non-coding upstream 801243 12869501 ~ 12869951 (-)
G2196 NA non-coding upstream 830173 12898431 ~ 12901945 (-)
G2234 NA non-coding upstream 963670 13031928 ~ 13032764 (-)
AMCG00003623 LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 other downstream 128266 11921991 ~ 11939783 (-)
AMCG00003618 NA other downstream 278774 11743989 ~ 11789275 (-)
AMCG00003595 myo6,LOC106571274 other downstream 951144 11063121 ~ 11116905 (-)
AMCG00003586 NA other downstream 1111696 10951084 ~ 10956353 (-)
AMCG00003587 naa20 other downstream 1434937 10625346 ~ 10633112 (-)
AMCG00003625 NA other upstream 7061 12075319 ~ 12078152 (-)
G2236 NA other upstream 966695 13034953 ~ 13035489 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other upstream 1003538 13071796 ~ 13116660 (-)
AMCG00003667 NA other upstream 1596485 13664743 ~ 13732039 (-)
G2373 esrrg other upstream 1941200 14009458 ~ 14013021 (-)

Expression


Co-expression Network