G2125


Basic Information

Item Value
gene id G2125
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 12220322 ~ 12259643 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2565
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagcattttgtggGACAAACCACACCGCATATCATAAATGAATACTTCAATCATGTAGTATTTGACATACTTATTTTGACATATCACTACCTGAACCAGAGTAGGCTTTCtcctttttcaattattttttgaatagACATTACAGATCACTTatatcataaataaaattattttgcgGACAAATGTCGTCCTGTTGTTCCAAACACCTGAATTGTGCACAATAGTACTACCTTAGTGTTTGCCAAAATATTTTCACTGCACAAATTAGAATAATGTGCTCAAATCCCCTACGTTGGTGTCTAGTGATCTTGACACTAGAGTCGCAGAGGAAGAGAATATTGTTCACTCTGATGATAACATCTTCACTACAGAAGTAGACGCACCGTTGAGGAATTGGTTCTCTCAGAGTGATGGTAGTTATgccttttattttgaatgctgTACATGTGGGGACATTAGGTTTCCAGGGCACTTCCACATTAAATATTTCTCAGAAAAGACAAAAATCCCATCTTTGTAACCTAATGCtgagaaataatatataactgTCATAAATGAGTGTCTAGTAATTCTGGCACTGGCAAAAAAGGTTGTATATGCATAACTGTTTTGCTCAGCAGCACTGTGAAAGAAAGGCAGATGAGCTTCAGGCTTTAAAGACTGTCCTTTAAAACTATGGATTATTTGActatttgttcatatttaatatgCAAGACTACACCAGCCCCAGTTTAACAGCTTTTCTGGTACAAGGTTATATCGGGGCTGCCATCACACTTCTGAGATTTCATCACAAATGCGTTCGATGTGGTTGActttattttgaactttttttttaatctatacatttaatttaagattaacataaattaaagtTAACTGACCTGCTATGAGGGTGCTTATAATCCTAGAGGTGGTAATAAACTATAGCACAGCTATTGACTAAGACTGTAAATGTCATGGGATgtcaattaagaaaattaatgagaaaataaaatctcatgTGTGACATCCAGATCATTAGAGAACAATATTTCTCTCATCCCCAGTCCCAATAAACATATTTGAGTGTAATGTGTATAGATAAATTCAACACAATACTTGTGGGgtcatttgcaaaacaaattatcaTTTCCATTTGACAAGATTGGAAAATGAATTTTAGCCAACAAATCAGAGCACAACAATTCCTTCATTTGCATAAGAGATTTGAGATTTAGTGGAAACCGAAACTgccaagttttttttccttttttattttttaatgtaactggGCATGCTGTGAAATTAACAGGTTTATGAGCAAATAATGAGAAATCcaggttttaaaatacaagctATTTAAGGCAACTTGtgaaaaaatctaatcaaaagAAATAAATGGAACAGGAGGAAGCCTAGCCAAGATGTGGGGGCTGGAAATGAGCAAGCCAGACAAAATGGCCAGCCCAGAACTGTGTCCAGATTATAGTACAAAACCAAcgctgattaaaaaaacaaaacgacacaGAAGGCATGATAACCACGCTCATTCAGAATCACAAGTGTAATTTCGTAGCGGTTGCTGTCAATAATGAACATGTATGGCTCCTGATGACGGACCAGTGGTGCCCTATGAAAAcggaatataaaacaaacattgcacCTCGAATGCGTTGCATACTGGTCGCCTGGTCACTCAGGTCTTACTACTTTATGACACTGCATGAACAGAAAAGGCATATTTCCTGCCTAAAACACCCCCTTCCCTCTTCCCCGCACCCCCCACATTAAAACCAATATCTACAAATACTTTTTGCAAGTGAGCAGTTCCTAAATGGCGCAGTGTAATACTGTGACCTATGTACAGAAGCGATGCTCGGGCCCAGCTCCATGATGGGGGTTTCCAACTGTGACCTACATGTTCCATAACCTTCGATGGTCTCAGATTCCAAAAAGCATAGGTAGAGATCGGTCATGACCCAAAAGTCATTTTACCCGTTTGCACATTTGCTTTTGCCGTGGAGAGAGTATACATCTCCCTCTGTTTGAGAAATGGCCATAACAGGATGACGGCAAGTTTACAGTTCTTGTCTCAACATCCACTCAATGTTAAACGGTGACAACGGTGAATTAGAAGTCATTCTTGTGCATCTTAATTGCATATTAATCTCAGAACACAACGGTCATCTTGTCCGAGTGGCCGATATTCCACAAGAGACTCTGGCAACCGACACCGACTCGCACTTATTGCACATGCTTTCAAAACCTTCCCATCTCCCTCCTGTGTTGATGCCGAGAGGACGCCAGCGTTACGAACAGTCTTTTGTGGAAATTTCCTCCTGTGCAATACATCGTTCTGAAAGGGGTAAACATGATGACAATGACttatttagaaagaaaagtGGGTTACAGCCCTGTTTGTGAGCTCTCCCAGATGATactatattaaatgaaaaccgACATCACCTGAACTATTTTATATGGGCCATCTTCACCGACCAAGTAACACGTAGCACAATCCCGATATCCCTCGCACTACGCACAGGGGAAAGGTGGTATCATTAATCTTAGTTTCTCTTGCCTATTTTTGAGAATCGATGCCGTTAAACGAAACCATAACGCATCCTAATGCCAAGTCCAGCACTGACACTCAGCCCAGACCCCTCCCCGGACCAATGGATGAATTGCAGCATGCTTAAACACAGTAGATCATAGGTCTCTTTACAGTGCAAGAAAAGCCACAACCAACTCTGTCATACTGACCCAGGATTAATAGTTTCACTAAGAGGgagaagacaaataaaataatatttaaaaaaaagggaagaaaacagTTGCAGAGGATGTATAGGCTTCCACACCAAGATGCTAATCCTTAAAACAAGCCACCTGTAATGGCAGGAAAGATTACAACACGTGAGCAGTCCGTTCTTCTGCAGCATGGcgggggggcaggggcaggcGTAGGCGTCTGCAATGGCCTCAGGAAGTGCCCTGTCGCTTTTGTTGCTGGGCTCGGATGATTTCAAGTTGTTTTTTGCACTGCTGGAAATACGTGGAGAGACTCTTGTTCTCCTCCAGGAGTTTCTTGTGCTCCTGGACCAAGCGGGACGTGTTCTGCTGGTCCTTCTCGTCCTGGTCCAGCTCTGCGATCAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2565 True 3170 lncRNA 0.40 2 12220322 12259643

Neighbor

gene id symbol gene type direction distance location
AMCG00003630 NA coding upstream 71423 12147640 ~ 12148899 (+)
AMCG00003628 NA coding upstream 75394 12132846 ~ 12144928 (+)
AMCG00003624 NA coding upstream 195388 12006436 ~ 12024934 (+)
AMCG00003622 NA coding upstream 363589 11851827 ~ 11856733 (+)
AMCG00003620 NA coding upstream 379826 11839737 ~ 11840496 (+)
AMCG00003634 NA coding downstream 590490 12850133 ~ 12854702 (+)
AMCG00003639 exoc8 coding downstream 606774 12866417 ~ 12868471 (+)
AMCG00003633 trim67,LOC106571401 coding downstream 612870 12872513 ~ 12880357 (+)
AMCG00003642 NA coding downstream 631525 12891168 ~ 12901958 (+)
AMCG00003641 NA coding downstream 659194 12918837 ~ 12926056 (+)
G2086 NA non-coding upstream 131336 12087537 ~ 12088986 (+)
G2042 NA non-coding upstream 192129 12026126 ~ 12028193 (+)
G2027 NA non-coding upstream 314134 11905983 ~ 11906188 (+)
G2018 NA non-coding upstream 388902 11813122 ~ 11831420 (+)
G1987 NA non-coding upstream 649912 11570052 ~ 11570410 (+)
G2139 NA non-coding downstream 127960 12387603 ~ 12388058 (+)
G2250 NA non-coding downstream 815045 13074688 ~ 13080021 (+)
G2264 NA non-coding downstream 838918 13098561 ~ 13101316 (+)
G2267 NA non-coding downstream 842814 13102457 ~ 13102666 (+)
G2281 NA non-coding downstream 967592 13227235 ~ 13228357 (+)
AMCG00003614 NA other upstream 490331 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 642993 11573731 ~ 11577329 (+)
AMCG00003606 NA other upstream 728725 11490185 ~ 11491597 (+)
AMCG00003604 NA other upstream 737391 11461663 ~ 11482931 (+)
AMCG00003570 NA other upstream 2438566 9777508 ~ 9781756 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other downstream 642923 12902566 ~ 12917002 (+)
AMCG00003648 LOC106571761 other downstream 765926 13025569 ~ 13042597 (+)
AMCG00003655 xdh other downstream 895417 13155060 ~ 13206839 (+)
G2440 NA other downstream 2158873 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 2592109 14851752 ~ 14866758 (+)

Expression


Co-expression Network