Gene
RNA
| Item | Value |
|---|---|
| gene id | G2142 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 12417928 ~ 12418336 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2590 | True | 409 | lncRNA | 0.41 | 1 | 12417928 | 12418336 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003632 | NA | coding | downstream | 134436 | 12256469 ~ 12283492 (-) |
| AMCG00003631 | NA | coding | downstream | 241296 | 12156367 ~ 12176632 (-) |
| AMCG00003629 | LOC104963585,LOC104944503 | coding | downstream | 287317 | 12079468 ~ 12130611 (-) |
| AMCG00003626 | rragd,LOC107564985,LOC107693082,LOC107583676,LOC108435430,LOC107755772 | coding | downstream | 440967 | 11958572 ~ 11976961 (-) |
| AMCG00003627 | ube2j1 | coding | downstream | 460274 | 11940494 ~ 11957654 (-) |
| AMCG00003638 | epha7 | coding | upstream | 164801 | 12583137 ~ 12595386 (-) |
| AMCG00003635 | epha7,LOC107567608 | coding | upstream | 200450 | 12618786 ~ 12624689 (-) |
| AMCG00003636 | ttc13,LOC106571397 | coding | upstream | 417181 | 12835517 ~ 12855317 (-) |
| AMCG00003640 | NA | coding | upstream | 439940 | 12858276 ~ 12860667 (-) |
| AMCG00003637 | NA | coding | upstream | 444471 | 12862807 ~ 12865753 (-) |
| G2140 | NA | non-coding | downstream | 29997 | 12387608 ~ 12387931 (-) |
| G2079 | NA | non-coding | downstream | 349670 | 12068049 ~ 12068258 (-) |
| G2071 | NA | non-coding | downstream | 366437 | 12051245 ~ 12051491 (-) |
| G2066 | NA | non-coding | downstream | 390770 | 12026919 ~ 12027158 (-) |
| G2052 | LOC100846954 | non-coding | downstream | 512257 | 11858921 ~ 11905671 (-) |
| G2168 | NA | non-coding | upstream | 451165 | 12869501 ~ 12869951 (-) |
| G2196 | NA | non-coding | upstream | 480095 | 12898431 ~ 12901945 (-) |
| G2234 | NA | non-coding | upstream | 613592 | 13031928 ~ 13032764 (-) |
| G2235 | NA | non-coding | upstream | 614903 | 13033239 ~ 13034060 (-) |
| G2257 | NA | non-coding | upstream | 659312 | 13077648 ~ 13080021 (-) |
| AMCG00003625 | NA | other | downstream | 339776 | 12075319 ~ 12078152 (-) |
| AMCG00003623 | LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 | other | downstream | 478145 | 11921991 ~ 11939783 (-) |
| AMCG00003618 | NA | other | downstream | 628653 | 11743989 ~ 11789275 (-) |
| AMCG00003595 | myo6,LOC106571274 | other | downstream | 1301023 | 11063121 ~ 11116905 (-) |
| AMCG00003586 | NA | other | downstream | 1461575 | 10951084 ~ 10956353 (-) |
| G2236 | NA | other | upstream | 616617 | 13034953 ~ 13035489 (-) |
| AMCG00003652 | parp1,xdh,LOC102777090,LOC107603072,LOC104966294 | other | upstream | 653460 | 13071796 ~ 13116660 (-) |
| AMCG00003667 | NA | other | upstream | 1246407 | 13664743 ~ 13732039 (-) |
| G2373 | esrrg | other | upstream | 1591122 | 14009458 ~ 14013021 (-) |
| G2500 | NA | other | upstream | 2392450 | 14810786 ~ 14811331 (-) |
