G2250


Basic Information

Item Value
gene id G2250
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13074688 ~ 13080021 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2723
aattaaaaaaaaaaaaaaaaaaaggtatattgAACTTAAAGGAACAGTATATGAGGTCATACCTCTGACTTTTCTATTGACACTCACCTTCCCCAGCTACTTAACTAACCAAAACTCAGGATCCTTTACTTGGATGCTGCGATTAAGATATTATTCAGACTTTGCTATTTGGCACCTGTAAGCACTACTgaacaaacagaagagcaaatCTCGCAGTGCNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2723 True 221 lncRNA 0.35 2 13074688 13080021

Neighbor

gene id symbol gene type direction distance location
AMCG00003647 NA coding upstream 19507 13053429 ~ 13055181 (+)
AMCG00003649 ccdc28a coding upstream 50449 13020377 ~ 13024239 (+)
AMCG00003641 NA coding upstream 148632 12918837 ~ 12926056 (+)
AMCG00003642 NA coding upstream 172730 12891168 ~ 12901958 (+)
AMCG00003633 trim67,LOC106571401 coding upstream 194331 12872513 ~ 12880357 (+)
AMCG00003653 NA coding downstream 11072 13091093 ~ 13092094 (+)
AMCG00003654 cnih4,LOC106584110 coding downstream 162030 13242051 ~ 13246855 (+)
AMCG00003656 NA coding downstream 240182 13320203 ~ 13325222 (+)
AMCG00003666 NA coding downstream 657581 13737602 ~ 13744368 (+)
AMCG00003668 NA coding downstream 717258 13797279 ~ 13797599 (+)
G2139 NA non-coding upstream 686630 12387603 ~ 12388058 (+)
G2125 NA non-coding upstream 815045 12220322 ~ 12259643 (+)
G2086 NA non-coding upstream 985702 12087537 ~ 12088986 (+)
G2042 NA non-coding upstream 1046495 12026126 ~ 12028193 (+)
G2027 NA non-coding upstream 1168500 11905983 ~ 11906188 (+)
G2264 NA non-coding downstream 18540 13098561 ~ 13101316 (+)
G2267 NA non-coding downstream 22436 13102457 ~ 13102666 (+)
G2281 NA non-coding downstream 147214 13227235 ~ 13228357 (+)
G2294 NA non-coding downstream 167288 13247309 ~ 13254443 (+)
G2323 NA non-coding downstream 334910 13414931 ~ 13415156 (+)
AMCG00003648 LOC106571761 other upstream 32091 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 157686 12902566 ~ 12917002 (+)
AMCG00003614 NA other upstream 1344697 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 1497359 11573731 ~ 11577329 (+)
AMCG00003606 NA other upstream 1583091 11490185 ~ 11491597 (+)
AMCG00003655 xdh other downstream 75039 13155060 ~ 13206839 (+)
G2440 NA other downstream 1338495 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 1771731 14851752 ~ 14866758 (+)
AMCG00003702 NA other downstream 2221059 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 2944850 16024871 ~ 16039640 (+)

Expression


Co-expression Network