G2285


Basic Information

Item Value
gene id G2285
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13131620 ~ 13143528 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2769
GTCAAATCAGATTAATGACAGAGCTGCGACGGGAAGGCaagcagtgacattttaaaccaGGGTAAACACAGACAAGCTCAGTTTAGGAGATACCTTGTGCAGTGGAAGGTCTTCCTACTCAGAAGAGCAATGGCTCCAGATGTTGATTGCGACAAactcttattttttgtaaatgggACAAAGattgTTGAAAAAAATGCTGATCCAGAAATGACCCTTTTGACGTATCTAAGAAGAAAATTGGGCCTGACAGGAACCAAGCTGGGCTGTGCTGAGGGAGGGTGCGGCGCTTGCACAGTGATGGTCTCCACGTTCCATCCCCATATGAACAAGATCGTGTATCCTTTCTTAACACGATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2769 True 360 lncRNA 0.45 3 13131620 13143528

Neighbor

gene id symbol gene type direction distance location
AMCG00003651 lin9,LOC107678835,LOC107726751,LOC107697095 coding downstream 66066 13055994 ~ 13065554 (-)
AMCG00003650 acbd3,LOC106571761 coding downstream 81228 13037692 ~ 13050392 (-)
AMCG00003645 NA coding downstream 163464 12926695 ~ 12968156 (-)
AMCG00003646 NA coding downstream 224731 12905372 ~ 12906889 (-)
AMCG00003644 NA coding downstream 240485 12883467 ~ 12891135 (-)
AMCG00003660 NA coding upstream 74013 13217541 ~ 13233616 (-)
AMCG00003661 NA coding upstream 90545 13234073 ~ 13236047 (-)
AMCG00003658 wdr26,LOC103044372 coding upstream 107570 13251098 ~ 13270245 (-)
AMCG00003657 NA coding upstream 137923 13281451 ~ 13283514 (-)
AMCG00003659 adcy3,LOC107688975 coding upstream 146771 13290299 ~ 13316898 (-)
G2266 NA non-coding downstream 30302 13100512 ~ 13101318 (-)
G2257 NA non-coding downstream 51599 13077648 ~ 13080021 (-)
G2235 NA non-coding downstream 97560 13033239 ~ 13034060 (-)
G2234 NA non-coding downstream 98856 13031928 ~ 13032764 (-)
G2196 NA non-coding downstream 229675 12898431 ~ 12901945 (-)
G2287 NA non-coding upstream 29104 13172632 ~ 13178172 (-)
G2291 xdh,LOC107752765,LOC107592779,LOC107733164,LOC107674096 non-coding upstream 89967 13233495 ~ 13236993 (-)
G2324 NA non-coding upstream 271333 13414861 ~ 13415156 (-)
G2337 NA non-coding upstream 364364 13507892 ~ 13508930 (-)
G2443 fzd3b,LOC107729283,LOC107734193,LOC107665105,LOC107589599,LOC108270052 non-coding upstream 1265708 14409236 ~ 14410253 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 14960 13071796 ~ 13116660 (-)
G2236 NA other downstream 96131 13034953 ~ 13035489 (-)
AMCG00003625 NA other downstream 1053468 12075319 ~ 12078152 (-)
AMCG00003623 LOC101472980,LOC105894864,LOC108427479,LOC105908251,LOC106571292,LOC105017864 other downstream 1191837 11921991 ~ 11939783 (-)
AMCG00003618 NA other downstream 1342345 11743989 ~ 11789275 (-)
AMCG00003667 NA other upstream 521215 13664743 ~ 13732039 (-)
G2373 esrrg other upstream 865930 14009458 ~ 14013021 (-)
G2500 NA other upstream 1667258 14810786 ~ 14811331 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 2372145 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 3463882 16607410 ~ 16628401 (-)

Expression


Co-expression Network