G2323


Basic Information

Item Value
gene id G2323
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13414931 ~ 13415156 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2819
cTCCCActggtaacgaactttgattacggactgtgactacgaacctgccttgcccctgtcgtgcttctgtttgcccggtgttcggctctaccgacccgggcatttactgttattgttagtgtttgttttgtagttagggattgttgacgtttagttagtgctcggacagagctaggttttgttttgctttttgacgctgtgcctgccattaagggaagcaataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2819 True 226 lncRNA 0.47 1 13414931 13415156

Neighbor

gene id symbol gene type direction distance location
AMCG00003656 NA coding upstream 89709 13320203 ~ 13325222 (+)
AMCG00003654 cnih4,LOC106584110 coding upstream 168076 13242051 ~ 13246855 (+)
AMCG00003653 NA coding upstream 322837 13091093 ~ 13092094 (+)
AMCG00003647 NA coding upstream 359750 13053429 ~ 13055181 (+)
AMCG00003649 ccdc28a coding upstream 390692 13020377 ~ 13024239 (+)
AMCG00003666 NA coding downstream 322446 13737602 ~ 13744368 (+)
AMCG00003668 NA coding downstream 382123 13797279 ~ 13797599 (+)
AMCG00003670 esrrga,LOC107582200,LOC107733169 coding downstream 594315 14009471 ~ 14013046 (+)
AMCG00003669 esrrga,LOC107719475 coding downstream 641295 14056451 ~ 14067694 (+)
AMCG00003673 NA coding downstream 676857 14092013 ~ 14190098 (+)
G2294 NA non-coding upstream 160488 13247309 ~ 13254443 (+)
G2281 NA non-coding upstream 186574 13227235 ~ 13228357 (+)
G2267 NA non-coding upstream 312265 13102457 ~ 13102666 (+)
G2264 NA non-coding upstream 313615 13098561 ~ 13101316 (+)
G2250 NA non-coding upstream 334910 13074688 ~ 13080021 (+)
G2326 NA non-coding downstream 70436 13485592 ~ 13485807 (+)
G2329 NA non-coding downstream 92731 13507887 ~ 13509930 (+)
G2330 NA non-coding downstream 95082 13510238 ~ 13510674 (+)
G2331 NA non-coding downstream 96379 13511535 ~ 13511829 (+)
G2332 NA non-coding downstream 97038 13512194 ~ 13512531 (+)
AMCG00003655 xdh other upstream 208092 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 372334 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 497929 12902566 ~ 12917002 (+)
AMCG00003614 NA other upstream 1684940 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 1837602 11573731 ~ 11577329 (+)
G2440 NA other downstream 1003360 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 1436596 14851752 ~ 14866758 (+)
AMCG00003702 NA other downstream 1885924 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 2609715 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 3617414 17032570 ~ 17042594 (+)

Expression


Co-expression Network