Gene
RNA
| Item | Value |
|---|---|
| gene id | G2333 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 13512600 ~ 13512998 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2829 | True | 399 | lncRNA | 0.40 | 1 | 13512600 | 13512998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003656 | NA | coding | upstream | 187378 | 13320203 ~ 13325222 (+) |
| AMCG00003654 | cnih4,LOC106584110 | coding | upstream | 265745 | 13242051 ~ 13246855 (+) |
| AMCG00003653 | NA | coding | upstream | 420506 | 13091093 ~ 13092094 (+) |
| AMCG00003647 | NA | coding | upstream | 457419 | 13053429 ~ 13055181 (+) |
| AMCG00003649 | ccdc28a | coding | upstream | 488361 | 13020377 ~ 13024239 (+) |
| AMCG00003666 | NA | coding | downstream | 224604 | 13737602 ~ 13744368 (+) |
| AMCG00003668 | NA | coding | downstream | 284281 | 13797279 ~ 13797599 (+) |
| AMCG00003670 | esrrga,LOC107582200,LOC107733169 | coding | downstream | 496473 | 14009471 ~ 14013046 (+) |
| AMCG00003669 | esrrga,LOC107719475 | coding | downstream | 543453 | 14056451 ~ 14067694 (+) |
| AMCG00003673 | NA | coding | downstream | 579015 | 14092013 ~ 14190098 (+) |
| G2332 | NA | non-coding | upstream | 69 | 13512194 ~ 13512531 (+) |
| G2331 | NA | non-coding | upstream | 771 | 13511535 ~ 13511829 (+) |
| G2330 | NA | non-coding | upstream | 1926 | 13510238 ~ 13510674 (+) |
| G2329 | NA | non-coding | upstream | 2670 | 13507887 ~ 13509930 (+) |
| G2326 | NA | non-coding | upstream | 26793 | 13485592 ~ 13485807 (+) |
| G2334 | NA | non-coding | downstream | 1662 | 13514660 ~ 13515065 (+) |
| G2336 | tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 | non-coding | downstream | 26974 | 13539972 ~ 13541154 (+) |
| G2380 | NA | non-coding | downstream | 566114 | 14079112 ~ 14079327 (+) |
| G2446 | NA | non-coding | downstream | 907733 | 14420731 ~ 14421310 (+) |
| G2517 | NA | non-coding | downstream | 1493348 | 15006346 ~ 15030368 (+) |
| AMCG00003655 | xdh | other | upstream | 305761 | 13155060 ~ 13206839 (+) |
| AMCG00003648 | LOC106571761 | other | upstream | 470003 | 13025569 ~ 13042597 (+) |
| AMCG00003643 | kif25,LOC100703631,LOC102203072 | other | upstream | 595598 | 12902566 ~ 12917002 (+) |
| AMCG00003614 | NA | other | upstream | 1782609 | 11725083 ~ 11729991 (+) |
| G1989 | cnr1,LOC104936193 | other | upstream | 1935271 | 11573731 ~ 11577329 (+) |
| G2440 | NA | other | downstream | 905518 | 14418516 ~ 14419732 (+) |
| AMCG00003690 | NA | other | downstream | 1338754 | 14851752 ~ 14866758 (+) |
| AMCG00003702 | NA | other | downstream | 1788082 | 15301080 ~ 15318228 (+) |
| AMCG00003712 | extl3,LOC106571659,LOC106608199 | other | downstream | 2511873 | 16024871 ~ 16039640 (+) |
| AMCG00003744 | NA | other | downstream | 3519572 | 17032570 ~ 17042594 (+) |
