G2334


Basic Information

Item Value
gene id G2334
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 13514660 ~ 13515065 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2830
GCATGCTGTCTCTATGCTAAGACACAGATATGTTTGTACTACAAGTGGACTACAAGGTACAAGACCATTTTAGTTACCTGATACAGCTCTATCCTCTGCTCGAAGACTCTCGCCTTCGGGTTTTGAATTCGGAAAACTCGCAGTTCAGCCTTCACCAGGTTTGAGGAGTTCTTCTCCATTGATGTGACATTAAACCTGAGGCGTCTAAAGTAAGGGTTGTATAATACTGAGGGAATGACATCTGAAAAGACACAAAGAGAAGGATGATTAGTATAGTAAGCTTACAATCCGATTGTGTACTGAGTACAACATACTAAAtcaaaaaaagtcaaatctaaacAAAGCAGAGATCATCAGTATTTTGGATGTGAGAAATCACAgcacacattttagttttctgtttctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2830 True 406 lncRNA 0.39 1 13514660 13515065

Neighbor

gene id symbol gene type direction distance location
AMCG00003656 NA coding upstream 189438 13320203 ~ 13325222 (+)
AMCG00003654 cnih4,LOC106584110 coding upstream 267805 13242051 ~ 13246855 (+)
AMCG00003653 NA coding upstream 422566 13091093 ~ 13092094 (+)
AMCG00003647 NA coding upstream 459479 13053429 ~ 13055181 (+)
AMCG00003649 ccdc28a coding upstream 490421 13020377 ~ 13024239 (+)
AMCG00003666 NA coding downstream 222537 13737602 ~ 13744368 (+)
AMCG00003668 NA coding downstream 282214 13797279 ~ 13797599 (+)
AMCG00003670 esrrga,LOC107582200,LOC107733169 coding downstream 494406 14009471 ~ 14013046 (+)
AMCG00003669 esrrga,LOC107719475 coding downstream 541386 14056451 ~ 14067694 (+)
AMCG00003673 NA coding downstream 576948 14092013 ~ 14190098 (+)
G2333 NA non-coding upstream 1662 13512600 ~ 13512998 (+)
G2332 NA non-coding upstream 2129 13512194 ~ 13512531 (+)
G2331 NA non-coding upstream 2831 13511535 ~ 13511829 (+)
G2330 NA non-coding upstream 3986 13510238 ~ 13510674 (+)
G2329 NA non-coding upstream 4730 13507887 ~ 13509930 (+)
G2336 tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 non-coding downstream 24907 13539972 ~ 13541154 (+)
G2380 NA non-coding downstream 564047 14079112 ~ 14079327 (+)
G2446 NA non-coding downstream 905666 14420731 ~ 14421310 (+)
G2517 NA non-coding downstream 1491281 15006346 ~ 15030368 (+)
G2563 NA non-coding downstream 1599564 15114629 ~ 15114837 (+)
AMCG00003655 xdh other upstream 307821 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 472063 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 597658 12902566 ~ 12917002 (+)
AMCG00003614 NA other upstream 1784669 11725083 ~ 11729991 (+)
G1989 cnr1,LOC104936193 other upstream 1937331 11573731 ~ 11577329 (+)
G2440 NA other downstream 903451 14418516 ~ 14419732 (+)
AMCG00003690 NA other downstream 1336687 14851752 ~ 14866758 (+)
AMCG00003702 NA other downstream 1786015 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 2509806 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 3517505 17032570 ~ 17042594 (+)

Expression


Co-expression Network