G2446


Basic Information

Item Value
gene id G2446
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 14420731 ~ 14421310 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2960
tgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatcatgcCCTCATCAGACAGCATTGTCACTCCACTGCTACACGAAGACCCCTCTCCCTCAGCATTTAGAAATCCTGTAGTTTACTGGCTCTACAGTTGTTGTGCatcttgtattttgaaatgattctCAGAGACTGGCAATTCACCCTCTGCTTTTTTGAGTTCCATTTAAAGACTAAAATATTGTATCACGTCACTTTGAATGATTCACTTttgaatgtgcttttcttttcagctcAACTGTCTTTAGGCCGTGCTTCTGAAATTCCCgttcaaaaactgaaataaatggttCCGATTGGTTTGTATAGATGGTAGTTAGTGTCCATTACAGTAGCATGACATCCAAGTCTGGTCTGAAACGGTTTCCTCTGCATTACCTAcactttttctttgtattgttttagcaCTTTAACtttgtgtttagttgttttaatgtgtatagATGTAAATTTTGGTTTTagacaatttaaataaagcttttgtaaagaaatgttGGGGAAGTTTTCCAAGATTACTTTGTGGATAATACCTG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106610361

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2960 True 580 lncRNA 0.42 1 14420731 14421310

Neighbor

gene id symbol gene type direction distance location
AMCG00003678 LOC108270052,LOC107665105,LOC107729283,LOC108428681,LOC107589599 coding upstream 4648 14408429 ~ 14416083 (+)
AMCG00003680 NA coding upstream 32181 14385138 ~ 14388550 (+)
AMCG00003679 nrbp1,LOC103372645 coding upstream 38139 14366316 ~ 14382592 (+)
AMCG00003674 NA coding upstream 85062 14329530 ~ 14335669 (+)
AMCG00003672 NA coding upstream 92046 14299567 ~ 14328685 (+)
AMCG00003683 NA coding downstream 119234 14540544 ~ 14548128 (+)
AMCG00003681 NA coding downstream 134680 14555990 ~ 14558193 (+)
AMCG00003682 NA coding downstream 143218 14564528 ~ 14580910 (+)
AMCG00003688 NA coding downstream 186676 14607986 ~ 14617192 (+)
AMCG00003691 NA coding downstream 575587 14996897 ~ 15005277 (+)
G2380 NA non-coding upstream 341404 14079112 ~ 14079327 (+)
G2336 tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 non-coding upstream 879577 13539972 ~ 13541154 (+)
G2334 NA non-coding upstream 905666 13514660 ~ 13515065 (+)
G2333 NA non-coding upstream 907733 13512600 ~ 13512998 (+)
G2332 NA non-coding upstream 908200 13512194 ~ 13512531 (+)
G2517 NA non-coding downstream 585036 15006346 ~ 15030368 (+)
G2563 NA non-coding downstream 693319 15114629 ~ 15114837 (+)
G2564 NA non-coding downstream 694395 15115705 ~ 15116972 (+)
G2571 NA non-coding downstream 707286 15128596 ~ 15130200 (+)
G2619 NA non-coding downstream 951885 15373195 ~ 15377637 (+)
G2440 NA other upstream 999 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 1213892 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 1378134 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 1503729 12902566 ~ 12917002 (+)
AMCG00003614 NA other upstream 2690740 11725083 ~ 11729991 (+)
AMCG00003690 NA other downstream 430442 14851752 ~ 14866758 (+)
AMCG00003702 NA other downstream 879770 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 1603561 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 2611260 17032570 ~ 17042594 (+)
G3047 NA other downstream 3260507 17681817 ~ 17683988 (+)

Expression


Co-expression Network