G2447


Basic Information

Item Value
gene id G2447
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 14420731 ~ 14421315 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU2961
GTCAGCAGGTATTATCCACAAAGTAATCTTGGAAAACTTCCCCaacatttctttacaaaagctttatttaaattgtctAAAACCAAAATTTACATctatacacattaaaacaactaaacacaaaGTTAAAGtgctaaaacaatacaaagaaaaagtgTAGGTAATGCAGAGGAAACCGTTTCAGACCAGACTTGGATGTCATGCTACTGTAATGGACACTAACTACCATCTATACAAACCAATCGGaaccatttatttcagtttttgaacGGGAATTTCAGAAGCACGGCCTAAAGACAGTTgagctgaaaagaaaagcacattcaaAAGTGAATCATTCAAAGTGACGTGATACAATATTTTAGTCTTTAAATGGAACTCAAAAAAGCAGAGGGTGAATTGCCAGTCTCTGagaatcatttcaaaatacaagatGCACAACAACTGTAGAGCCAGTAAACTACAGGATTTCTAAATGCTGAGGGAGAGGGGTCTTCGTGTAGCAGTGGAGTGACAATGCTGTCTGATGAGGgcatgatatacactcacctaaaggattattaggaacacctgttcaatttctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2961 True 585 lncRNA 0.47 1 14420731 14421315

Neighbor

gene id symbol gene type direction distance location
AMCG00003685 NA coding downstream 25827 14387555 ~ 14394904 (-)
AMCG00003677 LOC107733121,LOC107582237 coding downstream 66198 14338426 ~ 14354533 (-)
AMCG00003665 NA coding downstream 858534 13545351 ~ 13562197 (-)
AMCG00003664 tgfb2 coding downstream 905831 13509791 ~ 13514900 (-)
AMCG00003663 NA coding downstream 1021884 13387807 ~ 13398847 (-)
AMCG00003686 cdc42bpa coding upstream 4970 14426285 ~ 14461583 (-)
AMCG00003684 cdc42bpa coding upstream 55609 14476924 ~ 14483379 (-)
AMCG00003687 NA coding upstream 107326 14528641 ~ 14531680 (-)
AMCG00003689 NA coding upstream 196148 14617463 ~ 14644456 (-)
AMCG00003692 NA coding upstream 585102 15006417 ~ 15016678 (-)
G2445 NA non-coding downstream 999 14418578 ~ 14419732 (-)
G2444 LOC108270052,LOC108428681 non-coding downstream 5058 14415379 ~ 14415673 (-)
G2443 fzd3b,LOC107729283,LOC107734193,LOC107665105,LOC107589599,LOC108270052 non-coding downstream 10478 14409236 ~ 14410253 (-)
G2337 NA non-coding downstream 911801 13507892 ~ 13508930 (-)
G2324 NA non-coding downstream 1005575 13414861 ~ 13415156 (-)
G2494 NA non-coding upstream 277644 14698959 ~ 14699237 (-)
G2565 NA non-coding upstream 694668 15115983 ~ 15116183 (-)
G2615 NA non-coding upstream 894081 15315396 ~ 15318210 (-)
G2636 NA non-coding upstream 956882 15378197 ~ 15378555 (-)
G2637 NA non-coding upstream 957443 15378758 ~ 15378981 (-)
G2373 esrrg other downstream 407710 14009458 ~ 14013021 (-)
AMCG00003667 NA other downstream 688692 13664743 ~ 13732039 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 1304071 13071796 ~ 13116660 (-)
G2236 NA other downstream 1385242 13034953 ~ 13035489 (-)
AMCG00003625 NA other downstream 2342579 12075319 ~ 12078152 (-)
G2500 NA other upstream 389471 14810786 ~ 14811331 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other upstream 1094358 15515673 ~ 15591730 (-)
AMCG00003734 NA other upstream 2186095 16607410 ~ 16628401 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other upstream 2447017 16868332 ~ 16871475 (-)
AMCG00003751 NA other upstream 2715933 17137248 ~ 17140382 (-)

Expression


Co-expression Network