G2563


Basic Information

Item Value
gene id G2563
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15114629 ~ 15114837 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU3118
gagctccctgcccccctgggccctagtttaaaagattctcaatttctaTACActttcccaatgcattagccccccttctgttcagatgtagaccatccggtttgtacaggtcccatctatcccagaagaaggaccaatgctccataaacctaaacccctcttccctacaccaacatttcaaccacatgttaaactttctaatctctgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3118 True 209 lncRNA 0.46 1 15114629 15114837

Neighbor

gene id symbol gene type direction distance location
AMCG00003695 NA coding upstream 18105 15065016 ~ 15096524 (+)
AMCG00003696 NA coding upstream 60258 15019408 ~ 15054371 (+)
AMCG00003691 NA coding upstream 109352 14996897 ~ 15005277 (+)
AMCG00003688 NA coding upstream 497437 14607986 ~ 14617192 (+)
AMCG00003682 NA coding upstream 533719 14564528 ~ 14580910 (+)
AMCG00003694 NA coding downstream 29785 15144622 ~ 15156393 (+)
AMCG00003703 NA coding downstream 140219 15255056 ~ 15289576 (+)
AMCG00003705 NA coding downstream 219164 15334001 ~ 15334318 (+)
AMCG00003701 LOC106607895,LOC106571478 coding downstream 238641 15353478 ~ 15370866 (+)
AMCG00003706 NA coding downstream 279976 15394813 ~ 15398406 (+)
G2517 NA non-coding upstream 84261 15006346 ~ 15030368 (+)
G2446 NA non-coding upstream 693319 14420731 ~ 14421310 (+)
G2380 NA non-coding upstream 1035302 14079112 ~ 14079327 (+)
G2336 tgfb2,LOC106584161,LOC107689010,LOC106605021,LOC107725266 non-coding upstream 1573475 13539972 ~ 13541154 (+)
G2334 NA non-coding upstream 1599564 13514660 ~ 13515065 (+)
G2564 NA non-coding downstream 868 15115705 ~ 15116972 (+)
G2571 NA non-coding downstream 13759 15128596 ~ 15130200 (+)
G2619 NA non-coding downstream 258358 15373195 ~ 15377637 (+)
G2641 NA non-coding downstream 302139 15416976 ~ 15419869 (+)
G2681 NA non-coding downstream 789646 15904483 ~ 15904820 (+)
AMCG00003690 NA other upstream 247871 14851752 ~ 14866758 (+)
G2440 NA other upstream 694897 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 1907790 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 2072032 13025569 ~ 13042597 (+)
AMCG00003643 kif25,LOC100703631,LOC102203072 other upstream 2197627 12902566 ~ 12917002 (+)
AMCG00003702 NA other downstream 186243 15301080 ~ 15318228 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 910034 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 1917733 17032570 ~ 17042594 (+)
G3047 NA other downstream 2566980 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 3017082 18131919 ~ 18142633 (+)

Expression


Co-expression Network