G2681


Basic Information

Item Value
gene id G2681
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 15904483 ~ 15904820 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU3260
gaaacagagggtgttgattagaggagtcgcttctaactggagtgaggttgttagtggagttccacagggatcagtactagggcctttgctttttctgatctatattaatgatctggactctgggatagttagcaaacttgtcaaatttgcagatgatactaaaataggtggctcagcagatacaatctcggcagcacaggctattcaaagggacttagataatattcagttgtgggccgacacctggcagatgaaattcaatgtggacaagtgcaaggtattacatgcaggtaacaaaaatgtccactataattacactatgggaggaatagaactgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3260 True 338 lncRNA 0.42 1 15904483 15904820

Neighbor

gene id symbol gene type direction distance location
AMCG00003711 NA coding upstream 152622 15726442 ~ 15751861 (+)
AMCG00003706 NA coding upstream 506077 15394813 ~ 15398406 (+)
AMCG00003701 LOC106607895,LOC106571478 coding upstream 533617 15353478 ~ 15370866 (+)
AMCG00003705 NA coding upstream 570165 15334001 ~ 15334318 (+)
AMCG00003703 NA coding upstream 614907 15255056 ~ 15289576 (+)
AMCG00003713 NA coding downstream 166732 16071552 ~ 16079315 (+)
AMCG00003715 elp3,LOC107696156,LOC107698368,LOC107599080 coding downstream 232026 16136846 ~ 16161082 (+)
AMCG00003718 NA coding downstream 303027 16207847 ~ 16210277 (+)
AMCG00003720 mcm3 coding downstream 353634 16258454 ~ 16265698 (+)
AMCG00003719 NA coding downstream 382842 16287662 ~ 16288702 (+)
G2641 NA non-coding upstream 484614 15416976 ~ 15419869 (+)
G2619 NA non-coding upstream 526846 15373195 ~ 15377637 (+)
G2571 NA non-coding upstream 774283 15128596 ~ 15130200 (+)
G2564 NA non-coding upstream 787511 15115705 ~ 15116972 (+)
G2563 NA non-coding upstream 789646 15114629 ~ 15114837 (+)
G2698 NA non-coding downstream 127888 16032708 ~ 16032935 (+)
G2719 NA non-coding downstream 176362 16081182 ~ 16084866 (+)
G2721 NA non-coding downstream 180320 16085140 ~ 16085992 (+)
G2755 NA non-coding downstream 325115 16229935 ~ 16231498 (+)
G2797 NA non-coding downstream 524214 16429034 ~ 16430555 (+)
AMCG00003702 NA other upstream 586255 15301080 ~ 15318228 (+)
AMCG00003690 NA other upstream 1037725 14851752 ~ 14866758 (+)
G2440 NA other upstream 1484751 14418516 ~ 14419732 (+)
AMCG00003655 xdh other upstream 2697644 13155060 ~ 13206839 (+)
AMCG00003648 LOC106571761 other upstream 2861886 13025569 ~ 13042597 (+)
AMCG00003712 extl3,LOC106571659,LOC106608199 other downstream 120051 16024871 ~ 16039640 (+)
AMCG00003744 NA other downstream 1127750 17032570 ~ 17042594 (+)
G3047 NA other downstream 1776997 17681817 ~ 17683988 (+)
AMCG00003779 ctsb,catb,LOC107381178 other downstream 2227099 18131919 ~ 18142633 (+)
G3108 NA other downstream 2241840 18146660 ~ 18152314 (+)

Expression


Co-expression Network