G277


Basic Information

Item Value
gene id G277
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 1826497 ~ 1830075 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU330
CTTGTTTCATTCATGTTGCATTGCAGTGAAGATTATTCTGTAATAAGGAAGCTTGCctttcagtaaaaataaaataaaataaaataaagctaatATGGAATAAAAAGTGATTTGCCATAATTATCTACAAAATATTCCAGTCTAATCTTTCATAAGTCATAAATGCAAATACATCAGCAAAGATGTCAATAACACACTGTGCAAGAAACTGCAATTATTTCAAAGTTTTGTGAaaagggtaaataaataaatagcgtGTAGGTGTCTAcctattttgtttaaaaacctCAGTAACCAGGTATGACTGATTAAAAGCATTGGTCTGATGATAGCTATGATTAAAGTTCTGATAGGACTTGAAATGTACACATACTGAATAGTATTGAAGTGAATAGTATCTGGCACTATGCTTTAATTACAGGAGAGCTAATTCCTAAATAAAAGTTAAGCTTTTTAAAGTCAAGTGTTGAAAGTTCTCTTTCTGTAAGTAATCCAATACCATGCAATTCATCACGGAACTCTGAAATGGCAATGTAATCATGGGAGATTGTGAAGGTTCATTGTCTGGGCCAGTGTTACATTATGAAGGCCCAGTGTTAAAAATCGTCATCCAATGAGCTTTCTACATTAGGAAAATGCCTGCCCCTTAGGGAGAGAAAGCTCTCAATGAAACATTGTCTGTCTTTTGACATAGGTCACTTCTTGCTTTAGAAGGACATCTGAGGCAACAAGAGACAAATGTAGATGTTTTAATATGCATGTTAGAGCAACAGTGATACAATCCAACACAACTGCATTGCAATCTGTTCCAAGGCTCTGGGAAATCCAGGAATTAGTTAACCTATTCATTCCTGGACTGTGTATACAAAATGTGCCTTTGTTTCTTAAAAAGCAATACCTGTCAGTtctaaaatcacagttttatgcatctttatgtgttCTTATAGTGTCTACGTAAGATACACACCACTCTTCCAGACCGAGTCTaccatataagcaactttttaatatgttaaattaaaaatttaccaaataatggtggatgtcaaacTTAAGACTCATGCCAATTAGCTTTTCTTGGGCCCAGCCAACAAAAGTAGGTCAGTATAATGAAGACACTTCAATGGGCCTCTGGGCAGTGTGTTCAATTCTTATGTTAAGTTCCATATATTATTGAGTGCTGGGACAGTGCTCATTTTAAATTACCCTTAttgcaaaagacaaaataagaaCTACTTTGTGtagattgtactggaataagaaagttactatttacctggtgacaacacacacagtaacatacACTAGCCAATTCATACATACCAGCAGGTGTGTGGCATGGTCACATTACTGCACACAATCTCCCCTGCAGATTAATAACACCACctacaaattatttaatctgcCTAAATTCACCCAATTTTACAGCGATCTGTTATcttgaaatgtcctgactttaGATTGTGCAAAAGTTGGTTGCTTTAAGTTGAAGCTTTAATACCAGATTTCTACACTACATgaccaaaagtatgtggacacccgtTCTAATTAGTGGAGCTATTTCAgtcacacccattgctgacaggtgtataaaatcaagcacacataTATGCAATCTCCATatacaaacattggcagtagaatgggccgtactgaagagctcaTCATAAGATGCCACCTTTCAtcaatttctgccctgctagagctgcctcGGTCAACTGTAAGTTCCACTGATGGGAAATCTTAACTCTatagcatacaatgacattgtAGAAAATGTTGTGCTTCCAACATTggggcaacagtttggggaaggtcCTTTCCTgttgcagcatgacaatgccctaGTGCACAAAGTGAgatccatacagaaatggtatcaagattggtgtggaagaacttgactgttCTGCACAGAGCCTTGACCTCAACCCTATCGAAAAACTTTGGGATAAATTGGAAGAGATTTGCCTGGAGCCAGGCCtaatcgcccaacatcagtgcatggcctcactaatgctcttgtggctgaatggaagcaaatccctgcagcaatgttccaacatctagtggaaagccttcccagaagagtggagacTGTGATAGtagcaaaggggggaccaactccatattaatgcccatgattttggaatgagatgagCAGGTGTACACATTCTTTTGGTAATGTAGTGTACATTCTTATCTCTTTTATCATCTGAGAAAATGTGTAGCAAAGCAACATaacttaaaataacttaataaataatgatcccATCCTAGTTTGGACAGTTTTCTTGTGGCTCCAGAGCTGGAACACGTTAAAAGCAGCTGGtgctggagcagcagtgtggagctggagctgaacctcttgAGCAAACCCGGAGCACTTACAACCCTATTCTGTAGTTTGTTTCACTATTCTGGAAGTTATGACACTACATATCCAAAGAAATAGAGAGCATAAATGCTTAAGTTTGGCATTCACCattatttgttcagttttaaatgtaacatttttaaaagttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU330 True 2526 lncRNA 0.48 2 1826497 1830075

Neighbor

gene id symbol gene type direction distance location
AMCG00003407 nmbr,LOC106607916,LOC106571412 coding downstream 101915 1656385 ~ 1724582 (-)
AMCG00003404 NA coding downstream 571516 1253869 ~ 1254981 (-)
AMCG00003403 NA coding downstream 580443 1244554 ~ 1246054 (-)
AMCG00003402 NA coding downstream 609730 1068039 ~ 1216767 (-)
AMCG00003401 NA coding downstream 895919 919312 ~ 930578 (-)
AMCG00003416 NA coding upstream 240753 2070828 ~ 2088149 (-)
AMCG00003417 NA coding upstream 465375 2295450 ~ 2303413 (-)
AMCG00003418 NA coding upstream 500620 2330695 ~ 2337060 (-)
AMCG00003424 NA coding upstream 577979 2408054 ~ 2415951 (-)
AMCG00003426 NA coding upstream 677483 2507558 ~ 2523325 (-)
G263 NA non-coding downstream 111641 1714577 ~ 1714856 (-)
G257 NA non-coding downstream 238236 1587817 ~ 1588261 (-)
G212 NA non-coding downstream 667934 1142238 ~ 1158563 (-)
G188 NA non-coding downstream 790815 1033660 ~ 1035682 (-)
G122 NA non-coding downstream 1056511 734766 ~ 769986 (-)
G279 NA non-coding upstream 10723 1840798 ~ 1843781 (-)
G306 NA non-coding upstream 196846 2026921 ~ 2027350 (-)
G322 NA non-coding upstream 256383 2086458 ~ 2086758 (-)
G345 LOC107575789 non-coding upstream 516987 2347062 ~ 2347409 (-)
G372 NA non-coding upstream 575568 2405643 ~ 2406084 (-)
AMCG00003400 abracl,LOC107727609,LOC107558932,LOC107553474 other downstream 869301 945223 ~ 957196 (-)
AMCG00003423 NA other upstream 567567 2397642 ~ 2401895 (-)
AMCG00003422 NA other upstream 597322 2427397 ~ 2438821 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other upstream 1564582 3394657 ~ 3430272 (-)
AMCG00003444 NA other upstream 1706097 3536172 ~ 3538967 (-)
AMCG00003459 NA other upstream 2046157 3876232 ~ 3895524 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location