G279


Basic Information

Item Value
gene id G279
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 1840798 ~ 1843781 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU332
cccATCTTTACCATACCCTCCCCCACAGTAAGACCATCtctaaaaaacattacaatacaatgctCTTAATAAATGACCAACAAccaaattttatttaattttccaaaaaATCATGTTAACAAAGTAAAATTACAGAAATCTTtcaccaaagaaaaacaaataaaacattaattctgaCTAAGAATATTAAGACTGATACTCTATATgctatgtttttactttttgaaaaaGCATAGAGAAGTCCATCATTATATGTGCTCATATATGTAAAGTCAAGACCCagtaaataagcaaatacaagCATGCCAGCTAAGATGCATATCtataatgctttcaaaacagaatCTAAGTTAAATCTTGTAATATAGACAATGCTTATTGATAAGCCTAAAGAGTTGACTTCAAGACCCTAAAAGCTTAGTAAGTGACTCCCAAACATCTTCTGCTTTCCAGTAACAGGCTATCAATAAATGCAATACAGCAGGGGTCCAATATGGAGACACAGATTTCATTGTCGTTTATACTGAATTTCAGGGCTTCAACAGAATTGCTTTCTTCTGATACAACTGAGGGTGGCCTCTTAGTTCTTTTAGTCAGATAAATGATACAGTGACACTGCAGACAAAGACCTCATTCTTTGCCTGTAGTGAGTAACTTTAGGGCTTTCTGCAGATTCTGTACCGCTGCGCTTACATCTTCATACTGCAGAGCACTGCCAGCATACTTGCAGTATTTCTGAGCCCTGGTGAAGTCTTCTGGTGTTAGACGAACGTCACCTGCTGGTTGGTGCTCAGCAATGAGGGGTCAACTGCAGGAATATTCCTGGGAAGAGGCACTGGCTTGTCTGTTTCTCCTTTGAAAAACGATAGAAAAGACACTCAGTTCTCTGCCAGCCACACACTATATTTTCAgcggaaaaaagaaaaaacaaacaaatctagATTCTTTAATGATCTgctgaaaaaacatttcagatgtattattttgagtATTCTCTAATATCTTAACAATTCTATTGAAGTTAATTGAATTACGATATTTACTtgaatttacatatatacattaataaaggacatcaacataaataatataatccaCTATTTGTCATGTATTCtcccaattaaaaaacacatttctttataCTAGTCAGATTTTAAGAGTTACATATGTTCCTTAGTCCTAACAATTTCTTTGTTCCAAATCATATGATCCTTACTTGAAATTATCCC

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU332 True 1229 lncRNA 0.55 2 1840798 1843781

Neighbor

gene id symbol gene type direction distance location
AMCG00003407 nmbr,LOC106607916,LOC106571412 coding downstream 116216 1656385 ~ 1724582 (-)
AMCG00003404 NA coding downstream 585817 1253869 ~ 1254981 (-)
AMCG00003403 NA coding downstream 594744 1244554 ~ 1246054 (-)
AMCG00003402 NA coding downstream 624031 1068039 ~ 1216767 (-)
AMCG00003401 NA coding downstream 910220 919312 ~ 930578 (-)
AMCG00003416 NA coding upstream 227047 2070828 ~ 2088149 (-)
AMCG00003417 NA coding upstream 451669 2295450 ~ 2303413 (-)
AMCG00003418 NA coding upstream 486914 2330695 ~ 2337060 (-)
AMCG00003424 NA coding upstream 564273 2408054 ~ 2415951 (-)
AMCG00003426 NA coding upstream 663777 2507558 ~ 2523325 (-)
G277 NA non-coding downstream 10723 1826497 ~ 1830075 (-)
G263 NA non-coding downstream 125942 1714577 ~ 1714856 (-)
G257 NA non-coding downstream 252537 1587817 ~ 1588261 (-)
G212 NA non-coding downstream 682235 1142238 ~ 1158563 (-)
G188 NA non-coding downstream 805116 1033660 ~ 1035682 (-)
G306 NA non-coding upstream 183140 2026921 ~ 2027350 (-)
G322 NA non-coding upstream 242677 2086458 ~ 2086758 (-)
G345 LOC107575789 non-coding upstream 503281 2347062 ~ 2347409 (-)
G372 NA non-coding upstream 561862 2405643 ~ 2406084 (-)
G453 NA non-coding upstream 1161591 3005372 ~ 3005681 (-)
AMCG00003400 abracl,LOC107727609,LOC107558932,LOC107553474 other downstream 883602 945223 ~ 957196 (-)
AMCG00003423 NA other upstream 553861 2397642 ~ 2401895 (-)
AMCG00003422 NA other upstream 583616 2427397 ~ 2438821 (-)
G531 adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 other upstream 1550876 3394657 ~ 3430272 (-)
AMCG00003444 NA other upstream 1692391 3536172 ~ 3538967 (-)
AMCG00003459 NA other upstream 2032451 3876232 ~ 3895524 (-)

Expression


Co-expression Network