G2765


Basic Information

Item Value
gene id G2765
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 16247935 ~ 16250483 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU3373
NNNTGATCTGGTGAAGATTGCAGTGTTTCATGTAATACAGTAAGTCACACatattttccctcactgtatcagtGTTCCATTATTCTGCACCATTGTTCTAAAATATAGTGACTGGAATTTTTGGCAGAACACGAGGAGAGAGAAGACCTCTTCCCTTTCTACAAACacactgtgttttttattaataccaTCAGACATTTTCCCCACTAAAttaagaaatgtgcattttcagAGGCTCTGTATCGTTTACAAGCCCTGTGCTTGAAGCGGGCTGGTATGCAACACAACAGGGTGATGTACCACAATTTCTCCGTTTCTCAGAGTATCACCACGTCCCAATTCTCAATTCAAAAGAGTTATTTACCTGTGAGTATTTGTGTTATCACAATCCCTTTAATGGGCCTGAATATAATTTTGAGCACTCATTAGCCCCGgccctgtcatgtttatttttctgttacagCCGCTAAAAATACAGTCAGGTAGCACGCTGTATTTTCAGTGCCTTTATAGCtagactaaaaataaataagaaatagttTTAGCTTATTGCTTTCtggggagagaaagagcaaACAATGAAAGGTTCACAGCAGCGGGGAGGGGTTTTGCTGATTGTCTTAATTTCATGCTTTCTTAAATCAAGAAGATTTTTAACAGATTTCCTCATTTCTAGTGGAAGATTGGAAGATTCTTTGGTTCTGTATAGCGACTCAGTGTTCCAAGTTGATAACTTTTCAATTTTAGTAACTATTCAGTGAATAGTTTTGCTCTACAACCCAAAATACCTTTGTAGAGGTGCTGAGTGGGTTTGAAATGCCCCaatgtacatgtttaatagTATTTCTCCAAACCATTATGAAGCACTTAAGTTTTTAGTAGGAATAGGTAAACAAaggtattataaataaacaagcaaaaagaTCTGTGGTAGCATGGACTTGGTGTAAAGGTATAATTTTCACCTTTTAGACAATTTTCtcatttagaaatgtgtgtAATGAGAAGCACAGATGTTTATAGTTAGCTTTGTTGCTGGTAATTTCAGGGGGTGTTTATCTAATCTAAAGAAAGCAAACTTTGTCAGGTGTGATCACATCTTTGGAAATCATTGTACTGTTTTTAACTGAAGGTGCAAAAGAACAACCAACCCTTTTAACAAAATGAGACAAGAAGTATTAGAAAAACATACCAAGTGACTGCACTGTGGATCATTTTCAGTGCCCAATCTGAGACACTTAACTAAATAAATCTCCTCTGGCAGTTTAGGGATTACTGTGAGACATTATGAGGCACCAAGGGGTGTGTGTGACACTATCAGACGAGCCAGGATGAATgatgaaaatagtttttacaaCTAGACCGATATTTCCGACTGGAGATAATTTTCGAGATGATGAGATATATCGGTCGCTTACTGATGGTTAATTGTGTAAGATCACAAGTGCTATGCTTCTTGATATTTTCAGTGAGCCTAGAGCTGATTCACATATTAGCAAACACAGCGGATGGAAGGAGATAGGTATAGTGCATTGGTGAAACAGAGGCGATGAGGAGAGGTAGTGAATTCTGCTGAGAAATCATTCCCTTCTGTCCTCTGTTGAAAGAAGAGGGTACCTGTAAGTGCAGATGATGAGGAGAGACTGATTGGAGAAATTGAATGAGGAGAATGAGGAGCTTTTTAAGGGACCACTCCCTGTCACACCATTTTGCAGCCTGGAGAGAAACAACAGGTTCATCCAGTAAATCCACTAAGCAGAACAGTCAAGCACCTGGGAGCTGGGTGGGAACGAGAGCCAGAAGACCTCTCTAGGAACTGCAGGGCCCAGCTGTAACAGGAACATCAGGGAGTGCTGTCTTTACTGCAGACTCCAGCCATGACATCGTTCTGTACAATGatgtgttactgtgttaaatCTGTTAAAAGTATGTGCAGGGTGTTAACCGCTGAGCTCACCCTTGCATGaagaacacacagcacacaggtcTGCTGTTTTTCATACCTGACGATGACTCACCACATTTTTAGTTGTGTTGGGTGAGTGGGTAGCCATTAGAAGGAATCTATTTGCAGTAATGACAACTTAACAAGACAAAATATTCATTGTTTCTAACATAATAGTCACTATGGGgaacaatataattttataatatgaTAATTTTGCCATGATGGTGATGATTCTAAAACAAGAAATCTCTAAAACACTGTGTGTAGCCATAGGAGGGAATAGACTGGTTACACTTATAGCCAGAATaccataaaatgtgttatttttcttatattaactgttttatgttcatttaaattaaatgctggATTGTAACTGAAATACTTGAACACTAAATTACTGATTGTGATAATctactaaaataatgtatttctttctcacTTTGTGTGATTTCTTTCATGCAACATAGTCTAAACTGTAAGTtcaatgaaaaactaaaatacattaaaattttGATTAGTTTTATTCAAAATGGTGCTGACAAATCATgctaattgaaatgtaataaataatacattaaaattaaaaattaaaacaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3373 True 2549 lncRNA 0.44 1 16247935 16250483

Neighbor

gene id symbol gene type direction distance location
AMCG00003721 NA coding downstream 2328 16229657 ~ 16245607 (-)
AMCG00003722 NA coding downstream 25162 16212665 ~ 16222773 (-)
AMCG00003716 NA coding downstream 66768 16175771 ~ 16181167 (-)
AMCG00003717 NA coding downstream 131195 16095146 ~ 16116740 (-)
AMCG00003714 ints9 coding downstream 192282 16042728 ~ 16055653 (-)
AMCG00003723 NA coding upstream 1204 16251687 ~ 16258335 (-)
AMCG00003724 NA coding upstream 16417 16266900 ~ 16268503 (-)
AMCG00003726 stmn4 coding upstream 41874 16292357 ~ 16300392 (-)
AMCG00003725 gpn1,LOC107725955,LOC107729295,LOC107682285 coding upstream 57750 16308233 ~ 16319433 (-)
AMCG00003728 NA coding upstream 178544 16429027 ~ 16442526 (-)
G2722 NA non-coding downstream 161940 16085115 ~ 16085995 (-)
G2720 NA non-coding downstream 163069 16079399 ~ 16084866 (-)
G2699 NA non-coding downstream 215013 16032687 ~ 16032922 (-)
G2697 NA non-coding downstream 217749 16029424 ~ 16030186 (-)
G2682 NA non-coding downstream 343114 15904487 ~ 15904821 (-)
G2832 NA non-coding upstream 335579 16586062 ~ 16586266 (-)
G2834 NA non-coding upstream 337586 16588069 ~ 16588293 (-)
G2903 NA non-coding upstream 746307 16996790 ~ 16997604 (-)
G2902 NA non-coding upstream 790954 17041437 ~ 17042549 (-)
G2973 NA non-coding upstream 1003788 17254271 ~ 17254765 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other downstream 656205 15515673 ~ 15591730 (-)
G2500 NA other downstream 1436604 14810786 ~ 14811331 (-)
G2373 esrrg other downstream 2234914 14009458 ~ 14013021 (-)
AMCG00003667 NA other downstream 2515896 13664743 ~ 13732039 (-)
AMCG00003652 parp1,xdh,LOC102777090,LOC107603072,LOC104966294 other downstream 3131275 13071796 ~ 13116660 (-)
AMCG00003734 NA other upstream 356927 16607410 ~ 16628401 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other upstream 617849 16868332 ~ 16871475 (-)
AMCG00003751 NA other upstream 886765 17137248 ~ 17140382 (-)
G3181 NA other upstream 1692094 17942577 ~ 17944942 (-)
AMCG00003784 NA other upstream 1884896 18135379 ~ 18142681 (-)

Expression


Co-expression Network