G2902


Basic Information

Item Value
gene id G2902
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 17041437 ~ 17042549 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU3538
CCTAGAGGAACTTGTCTGCTGGATCCCCCCACCACAGTGCACTCAGTGACTGTAATCAAGACTTTAGCTACGTGTCAATAATCTGGGCATCAGTCCTTCTCTGTGGTTTTCTGATCCATAAGCAGGTGATGATCGGTAACTTTTCCAGAATTTCACAGCCACCTTGAAATCACCAGCGGCCTAAATTGGAATTTAACTGCCAATACTTATTTTGATTTGTCATAtcgttatttttatttactgctAGATGTTCCTCACGACCCCTAGGTTaagaacccctgctctagaaaAACAGCACGTATGGTTTGAGCATCGATCTTGATCTCATATAAAATGCACGATTAAATGTGGACAAAACCTATACACCGCACTGCAGCTCAAATCCCAGGTGTTTGGGTGGTGGCCAGTTCACAGAAGCTGAAAACCAAAATCCTGTTTAGTTACAGAAATGTGGCCGAGCCAGATTTACACTTCAGATTCCACACACAGATCCAGCTAAGATAGTGTAGTGTGTGTCTCTGGCCTACAAGGGTTTCCCGGCCTTAGTTCCGAGTTGGTTTTCACTCCCTTTCCTTTCCTTgagcccttaattgaactagCTTGAACTGAATTAGCTCCTTTCTagcttttataatttattattcagACCTGGGTTTCAGATTCTTTCTGCTTCGTGTGTGTTTTTCGCAAGACATTCGTCAAGCAGAAAAACAGTCTGTGTCCTCAGCTTGTTTAATGAGCTGCTACCGCTCTCTTAAAGCTGTCTAAACAACTCTTAACAGGTTACCAAGTAGTGATGCACAGAGAAGTTTAGGAAGTACATGGCCTCAAACACTCCCCTCGTAAACATGGCAAATTCTTCTCCGGCTCATCTGATCACATTCCAGACACCTGCTCAGTGAACTGCACCCCTACATGAGAGCAGCTCTAAAACCTGGCACTCACGGAGGAGTTTAATAAGATTTTCTGCACAACAAATTGTCTTGTTCAGGAGCTCTAATTAGATTTAATAAAGGTTGCATCAAGGTGTATTTGATTAGTCGATGGGAGCAAGAGTTCATCTGGAACCAAAACCAGAAAACGGAGACCGGTATTCACAGAACGCACATCGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3538 True 1113 lncRNA 0.44 1 17041437 17042549

Neighbor

gene id symbol gene type direction distance location
AMCG00003748 NA coding downstream 27663 16998780 ~ 17013774 (-)
AMCG00003747 kif26b,LOC102197193,LOC107097817 coding downstream 47415 16993119 ~ 16994022 (-)
AMCG00003740 kif26b,kif26ba,LOC107682227,LOC107693166 coding downstream 148558 16883972 ~ 16892879 (-)
AMCG00003741 NA coding downstream 160315 16880036 ~ 16881122 (-)
AMCG00003735 NA coding downstream 389935 16644360 ~ 16651502 (-)
AMCG00003746 NA coding upstream 1085 17043634 ~ 17047025 (-)
AMCG00003753 NA coding upstream 162764 17205313 ~ 17229181 (-)
AMCG00003754 prox1a,LOC107592773,LOC107752784 coding upstream 233093 17275642 ~ 17291950 (-)
AMCG00003757 rps6kc1 coding upstream 426791 17469340 ~ 17513471 (-)
AMCG00003758 NA coding upstream 471967 17514516 ~ 17526657 (-)
G2903 NA non-coding downstream 43833 16996790 ~ 16997604 (-)
G2834 NA non-coding downstream 453144 16588069 ~ 16588293 (-)
G2832 NA non-coding downstream 455171 16586062 ~ 16586266 (-)
G2765 NA non-coding downstream 790954 16247935 ~ 16250483 (-)
G2722 NA non-coding downstream 955442 16085115 ~ 16085995 (-)
G2973 NA non-coding upstream 211722 17254271 ~ 17254765 (-)
G2972 NA non-coding upstream 215388 17257937 ~ 17259543 (-)
G3170 odc1,LOC107687948,LOC107753348,LOC107758719,LOC107687839 non-coding upstream 893291 17935840 ~ 17940712 (-)
G3257 NA non-coding upstream 1367321 18409870 ~ 18418066 (-)
G3266 NA non-coding upstream 1396552 18439101 ~ 18439510 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other downstream 169962 16868332 ~ 16871475 (-)
AMCG00003734 NA other downstream 413036 16607410 ~ 16628401 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other downstream 1449707 15515673 ~ 15591730 (-)
G2500 NA other downstream 2230106 14810786 ~ 14811331 (-)
G2373 esrrg other downstream 3028416 14009458 ~ 14013021 (-)
AMCG00003751 NA other upstream 94699 17137248 ~ 17140382 (-)
G3181 NA other upstream 900028 17942577 ~ 17944942 (-)
AMCG00003784 NA other upstream 1092830 18135379 ~ 18142681 (-)
AMCG00003782 ctsb other upstream 1104111 18146660 ~ 18152381 (-)
AMCG00003825 NA other upstream 2319269 19361818 ~ 19373225 (-)

Expression


Co-expression Network