G3181


Basic Information

Item Value
gene id G3181
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 17942577 ~ 17944942 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU3879
TTCCTGTAGGAGACGGAAGGGCTGGATTTGATGAGGACGCGAGCCAGCGTCTGCACACGGCCACCCCAGCACCAGGGTGTGGGAATGAAGCGCTCAGCCACCACAGGGCAGTGCTGCTCCAGGAACACCCGGAAGCCATCGCTGCACACCAACACAGGCATCTGGAGCACAGGTTAGAGAGAGTGAGTCTCAGGTGTACCTGTAACCTGCGTTTCTCTAAAAGACACAGAACTGGAAGACACAACAGGCAAGACTGAGCAGATGGCACTGTGCATTTACTGCAGTGCTGGGCAGGAACCTGATCCTGGGTGCAGAGGTGCAAACCTATGGGTTTTCTAGGTCTGTTTAAAACACCTGGCACACTGTTTATAACCTTGGTGCAATGTTGAATTGCTtcaaatttataataatatattgcattgaTGTAGCACCTTTCGTGAAAGATGATCCCACAGCACTTTACAATTAAGAGGTATCTGACAACAGACACAGCCAGGCTTGCAGAAACAGGGCTGCCCAGGGCTGTTTTATTGCACAAGTATTCCAACCATAGAGAGGAGGGGTCAGCAAGTGTGGTCAattggggtgtgggggggtgtcaATCTACAAACACAGACTTCTCACTGTGGTCCCTATGTGAGTACAGCTGGGGCCACAGTAAGAGAGAGAATTTGGGGAAACATTGCATTTGTGAACGAGGACAGGCTGGGTCCTCTGCTCCTCCGCACATGACAAACACAACAAAGTAACTCCCGCCCTGCTTCCATTCAAAATGTAACTTTCATAGACGGTGAGCAGATTCCATGCAATCAATCATAAGTGACACACTATCACATTACTTACATTCTTTCCATAAACTTTAGTTTtaaagatatgtatttattatgttcaGCATGCTACAATgcagaacaatacaaaacatatttttttggtAGCTTTAAAAAGAAGGAAACAGGGGGGAGTTAGGGGAATGAGACTTGCTAAACGGTTAAGGCCCTCTGAAAACCTAGAAAGCAGCAGCAATCTCCTAAGTAAACCTGAGGAAAGCAGTGATTGTACGTGCACTGTAACTGGTCACAGGTGGAGTACTGCCCTCCACACCGACACTGACCTGCCCCTGAGAGCCCCACAGGTAGTACACGAAGGCCGAGACAGCGGCCAGGCCCAGCGCATAGGGCCTGCTCAGGTAGTCCGTACACAGTTCAAACACTTCATCGTGGATAACTTGCATGACCGACATGGCCCACATAATCACCAACAGGAAATTATAAAATAgctgaaagtgacaacaggttgGTTTTCTGAGATGGAACTTTTGGGATACACGGCTGGTTTACGCGTAAAACGACCGAGTTGTTACTTTTTCACTCCGACAGCCAACTGActgaaatgtgctttttctACAACAGGCGGTCCAGAAAAGGTTCACTAATGCAGATAGACGGGATagtataaatgcaatataacgAAACAGAAGGGCGCTTAAGTCGAGGTAGGGTGACTAAAAcgtgtatattattataatgttcaaataaaacagGGTTCCCATTATCCGGTCAACAGTGCTGTATGTTATCAAAAGCTACCGCCGGTCTGCCGTTTCCTATGTCACAGTACAACCAGTCTTGTAAACATTtgaatggatacatttaaatgaatagttGCATCACATTCGACATTAAGCAAAATGATCCCTTatcaattaaagttaatatagtagtagtagtagtactgtaAGTGTAGCAAAGCGGAAGTAGCGGTCCCGTCATACAGAAAACGGAGGACTAGGATCTTAACGCCCGTGTATTCAAATAAATCCGACCTTCGCTATGTACTTGACCACTTGTACCAGTTGCAGACGAAATTAAACGTATTTTTATTGCTCGCGAAATAGACACGAATACCACACGCAAACAATcgtttatacatgtatttgtaagGACAACACGAATGTAAACCGGCGATGTCAAACCAATACAGAATGACTATTCCGACCACTGCTCGCTAGGACCCACACATAGCTGCCCCCAAACCTGCCTTTACAAGAAACATCAACGGACTCGGATTGATTAATTGTTGTCCTTCTCCCAGCAACCTGGACGCTTCTATTATCTAACTTGTTTTCTCCGGCGAACTTGAAAATGTCACATAAAGATGTTCTTTGCGAATGGCGAAAAAACAAGGTTATTTTGTGAACTCGTCAATTGATACATCCAGGGATAAAAACGGAGAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3879 True 2237 TUCP 0.51 2 17942577 17944942

Neighbor

gene id symbol gene type direction distance location
AMCG00003776 NA coding downstream 45662 17889983 ~ 17896915 (-)
AMCG00003770 LOC107585532,LOC107675519 coding downstream 65991 17875147 ~ 17876586 (-)
AMCG00003768 NA coding downstream 151520 17789939 ~ 17791057 (-)
AMCG00003764 NA coding downstream 157987 17779479 ~ 17784590 (-)
AMCG00003765 NA coding downstream 239351 17680446 ~ 17703226 (-)
AMCG00003777 NA coding upstream 25870 17970812 ~ 18000814 (-)
AMCG00003778 LOC107594834 coding upstream 59229 18004171 ~ 18027626 (-)
AMCG00003780 NA coding upstream 160146 18105088 ~ 18124295 (-)
AMCG00003781 LOC103364986,LOC107735240 coding upstream 211916 18156858 ~ 18161968 (-)
AMCG00003783 NA coding upstream 218684 18163626 ~ 18175704 (-)
G3170 odc1,LOC107687948,LOC107753348,LOC107758719,LOC107687839 non-coding downstream 1865 17935840 ~ 17940712 (-)
G2972 NA non-coding downstream 683034 17257937 ~ 17259543 (-)
G2973 NA non-coding downstream 687812 17254271 ~ 17254765 (-)
G2902 NA non-coding downstream 900028 17041437 ~ 17042549 (-)
G2903 NA non-coding downstream 944973 16996790 ~ 16997604 (-)
G3257 NA non-coding upstream 464928 18409870 ~ 18418066 (-)
G3266 NA non-coding upstream 494159 18439101 ~ 18439510 (-)
G3270 NA non-coding upstream 600411 18545353 ~ 18545976 (-)
G3354 NA non-coding upstream 930640 18875582 ~ 18878573 (-)
G3374 NA non-coding upstream 1004830 18949772 ~ 18950252 (-)
AMCG00003751 NA other downstream 802195 17137248 ~ 17140382 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other downstream 1071102 16868332 ~ 16871475 (-)
AMCG00003734 NA other downstream 1314176 16607410 ~ 16628401 (-)
G2665 crim1,LOC107679775,LOC107730201,LOC107602268,LOC107662656,LOC106601300 other downstream 2350847 15515673 ~ 15591730 (-)
G2500 NA other downstream 3131246 14810786 ~ 14811331 (-)
AMCG00003784 NA other upstream 190437 18135379 ~ 18142681 (-)
AMCG00003782 ctsb other upstream 201718 18146660 ~ 18152381 (-)
AMCG00003825 NA other upstream 1416876 19361818 ~ 19373225 (-)
G3517 LOC101154678 other upstream 1480021 19424963 ~ 19425366 (-)
G3523 NA other upstream 1499074 19444016 ~ 19506753 (-)

Expression


Co-expression Network