G3395


Basic Information

Item Value
gene id G3395
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 19045807 ~ 19046205 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU4124
CCCTTCTCCCCACCCCTGTCGCCAGTGCGGGGCCTGTCCCGACGCAATCTCTTACCGTCTCCGCCGCCGCTCCCCGGGCCACCTTCAACACCCGAGACACCGCCACCGAGTCTCCGCAGGGCCGGGGTGCTGTCAGAGACGCGGGGAGGAGGAACTTGAGGAAGGGGGTATGGAGAGCACCCTGGCCTGCCGTGCGGTGGTAggagccggggggggggggagagcaCGCCGCCGCTCCCCGCTGCTTCAGAGTCTCGGGGAAATCGTTTGACAGTTcccctgctttttttttctctctctctctctttactcccccccttatttttttttcttttcctttctatCTTCCAAAACCGATACGAATCAAAATACTGTCACACAATATGGCGGCCGCGCTAG

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4124 True 399 lncRNA 0.61 1 19045807 19046205

Neighbor

gene id symbol gene type direction distance location
AMCG00003808 amd1,dcam coding downstream 74712 18951252 ~ 18971095 (-)
AMCG00003809 rpf2,LOC102791246 coding downstream 97147 18944095 ~ 18948660 (-)
AMCG00003811 NA coding downstream 107843 18931764 ~ 18937964 (-)
AMCG00003807 NA coding downstream 133293 18892764 ~ 18912514 (-)
AMCG00003806 NA coding downstream 156595 18879535 ~ 18889212 (-)
AMCG00003817 NA coding upstream 42993 19089198 ~ 19098312 (-)
AMCG00003819 ppil4 coding upstream 73610 19119815 ~ 19131852 (-)
AMCG00003820 katna1 coding upstream 96714 19142919 ~ 19150162 (-)
AMCG00003818 lats1,LOC107742997 coding upstream 106411 19152616 ~ 19169651 (-)
AMCG00003821 NA coding upstream 134474 19180679 ~ 19196676 (-)
G3374 NA non-coding downstream 95555 18949772 ~ 18950252 (-)
G3354 NA non-coding downstream 167234 18875582 ~ 18878573 (-)
G3270 NA non-coding downstream 499831 18545353 ~ 18545976 (-)
G3266 NA non-coding downstream 606297 18439101 ~ 18439510 (-)
G3257 NA non-coding downstream 627741 18409870 ~ 18418066 (-)
G3402 NA non-coding upstream 31251 19077456 ~ 19077864 (-)
G3403 NA non-coding upstream 33229 19079434 ~ 19079665 (-)
G3405 NA non-coding upstream 38499 19084704 ~ 19086692 (-)
G3470 pcmt1,LOC107554157 non-coding upstream 129367 19175572 ~ 19180511 (-)
G3482 NA non-coding upstream 310440 19356645 ~ 19357239 (-)
AMCG00003782 ctsb other downstream 893426 18146660 ~ 18152381 (-)
AMCG00003784 NA other downstream 903126 18135379 ~ 18142681 (-)
G3181 NA other downstream 1100865 17942577 ~ 17944942 (-)
AMCG00003751 NA other downstream 1905425 17137248 ~ 17140382 (-)
AMCG00003742 kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 other downstream 2174332 16868332 ~ 16871475 (-)
AMCG00003825 NA other upstream 315613 19361818 ~ 19373225 (-)
G3517 LOC101154678 other upstream 378758 19424963 ~ 19425366 (-)
G3523 NA other upstream 397811 19444016 ~ 19506753 (-)
AMCG00003893 NA other upstream 4483314 23529519 ~ 23533882 (-)
AMCG00003896 tmem181 other upstream 4694380 23740585 ~ 23757796 (-)

Expression


Co-expression Network