Gene
RNA
| Item | Value |
|---|---|
| gene id | G3517 |
| gene name | LOC101154678 |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 19424963 ~ 19425366 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU4265 | True | 404 | TUCP | 0.53 | 1 | 19424963 | 19425366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003824 | NA | coding | downstream | 34244 | 19388365 ~ 19390719 (-) |
| AMCG00003823 | ctgf,LOC106571301,LOC107683930,LOC107737382 | coding | downstream | 137780 | 19283996 ~ 19287183 (-) |
| AMCG00003822 | map3k5 | coding | downstream | 184368 | 19201663 ~ 19240595 (-) |
| AMCG00003821 | NA | coding | downstream | 228287 | 19180679 ~ 19196676 (-) |
| AMCG00003818 | lats1,LOC107742997 | coding | downstream | 255312 | 19152616 ~ 19169651 (-) |
| AMCG00003829 | NA | coding | upstream | 49523 | 19474889 ~ 19478369 (-) |
| AMCG00003830 | NA | coding | upstream | 197243 | 19622609 ~ 19624841 (-) |
| AMCG00003831 | NA | coding | upstream | 251763 | 19677129 ~ 19677768 (-) |
| AMCG00003834 | LOC101882414,LOC101885221,LOC107674786,LOC107572727 | coding | upstream | 364027 | 19789393 ~ 19789825 (-) |
| AMCG00003837 | NA | coding | upstream | 651749 | 20077115 ~ 20078155 (-) |
| G3482 | NA | non-coding | downstream | 67724 | 19356645 ~ 19357239 (-) |
| G3470 | pcmt1,LOC107554157 | non-coding | downstream | 244452 | 19175572 ~ 19180511 (-) |
| G3405 | NA | non-coding | downstream | 338271 | 19084704 ~ 19086692 (-) |
| G3403 | NA | non-coding | downstream | 345298 | 19079434 ~ 19079665 (-) |
| G3402 | NA | non-coding | downstream | 347099 | 19077456 ~ 19077864 (-) |
| G3535 | NA | non-coding | upstream | 287469 | 19712835 ~ 19713052 (-) |
| G3552 | NA | non-coding | upstream | 474603 | 19899969 ~ 19900381 (-) |
| G3553 | NA | non-coding | upstream | 476716 | 19902082 ~ 19903092 (-) |
| G3554 | NA | non-coding | upstream | 482664 | 19908030 ~ 19908341 (-) |
| G3584 | NA | non-coding | upstream | 603497 | 20028863 ~ 20416071 (-) |
| AMCG00003825 | NA | other | downstream | 51738 | 19361818 ~ 19373225 (-) |
| AMCG00003782 | ctsb | other | downstream | 1272582 | 18146660 ~ 18152381 (-) |
| AMCG00003784 | NA | other | downstream | 1282282 | 18135379 ~ 18142681 (-) |
| G3181 | NA | other | downstream | 1480021 | 17942577 ~ 17944942 (-) |
| AMCG00003751 | NA | other | downstream | 2284581 | 17137248 ~ 17140382 (-) |
| G3523 | NA | other | upstream | 18650 | 19444016 ~ 19506753 (-) |
| AMCG00003893 | NA | other | upstream | 4104153 | 23529519 ~ 23533882 (-) |
| AMCG00003896 | tmem181 | other | upstream | 4315219 | 23740585 ~ 23757796 (-) |
| AMCG00003909 | NA | other | upstream | 4838541 | 24263907 ~ 24296246 (-) |
| G4521 | fig4 | other | upstream | 6472568 | 25897934 ~ 25901612 (-) |
