Gene
RNA
| Item | Value |
|---|---|
| gene id | G3554 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 19908030 ~ 19908341 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU4307 | True | 312 | lncRNA | 0.32 | 1 | 19908030 | 19908341 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003834 | LOC101882414,LOC101885221,LOC107674786,LOC107572727 | coding | downstream | 118205 | 19789393 ~ 19789825 (-) |
| AMCG00003831 | NA | coding | downstream | 230262 | 19677129 ~ 19677768 (-) |
| AMCG00003830 | NA | coding | downstream | 283189 | 19622609 ~ 19624841 (-) |
| AMCG00003829 | NA | coding | downstream | 429661 | 19474889 ~ 19478369 (-) |
| AMCG00003824 | NA | coding | downstream | 517311 | 19388365 ~ 19390719 (-) |
| AMCG00003837 | NA | coding | upstream | 168774 | 20077115 ~ 20078155 (-) |
| AMCG00003838 | NA | coding | upstream | 595758 | 20504099 ~ 20512976 (-) |
| AMCG00003840 | NA | coding | upstream | 981791 | 20890132 ~ 20898701 (-) |
| AMCG00003842 | LOC106607755,LOC106571353 | coding | upstream | 1000049 | 20908390 ~ 20920636 (-) |
| AMCG00003841 | LOC108432850,LOC106607755 | coding | upstream | 1042094 | 20950435 ~ 20959586 (-) |
| G3553 | NA | non-coding | downstream | 4938 | 19902082 ~ 19903092 (-) |
| G3552 | NA | non-coding | downstream | 7649 | 19899969 ~ 19900381 (-) |
| G3535 | NA | non-coding | downstream | 194978 | 19712835 ~ 19713052 (-) |
| G3482 | NA | non-coding | downstream | 550791 | 19356645 ~ 19357239 (-) |
| G3470 | pcmt1,LOC107554157 | non-coding | downstream | 727519 | 19175572 ~ 19180511 (-) |
| G3584 | NA | non-coding | upstream | 120522 | 20028863 ~ 20416071 (-) |
| G3587 | NA | non-coding | upstream | 330172 | 20238513 ~ 20239078 (-) |
| G3602 | NA | non-coding | upstream | 459664 | 20368005 ~ 20372943 (-) |
| G3607 | NA | non-coding | upstream | 482842 | 20391183 ~ 20419999 (-) |
| G3616 | LOC107575789 | non-coding | upstream | 667671 | 20576012 ~ 20576914 (-) |
| G3523 | NA | other | downstream | 401277 | 19444016 ~ 19506753 (-) |
| G3517 | LOC101154678 | other | downstream | 482664 | 19424963 ~ 19425366 (-) |
| AMCG00003825 | NA | other | downstream | 534805 | 19361818 ~ 19373225 (-) |
| AMCG00003782 | ctsb | other | downstream | 1755649 | 18146660 ~ 18152381 (-) |
| AMCG00003784 | NA | other | downstream | 1765349 | 18135379 ~ 18142681 (-) |
| AMCG00003893 | NA | other | upstream | 3621178 | 23529519 ~ 23533882 (-) |
| AMCG00003896 | tmem181 | other | upstream | 3832244 | 23740585 ~ 23757796 (-) |
| AMCG00003909 | NA | other | upstream | 4355566 | 24263907 ~ 24296246 (-) |
| G4521 | fig4 | other | upstream | 5989593 | 25897934 ~ 25901612 (-) |
| AMCG00003946 | NA | other | upstream | 6057079 | 25965420 ~ 25998628 (-) |
