Gene
RNA
| Item | Value |
|---|---|
| gene id | G3771 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 21745850 ~ 21760630 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04142 | Lysosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU4563 | True | 605 | TUCP | 0.38 | 2 | 21745850 | 21760630 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003847 | NA | coding | upstream | 210092 | 21491884 ~ 21535758 (+) |
| AMCG00003846 | NA | coding | upstream | 298729 | 21440114 ~ 21447121 (+) |
| AMCG00003845 | NA | coding | upstream | 307171 | 21348227 ~ 21438679 (+) |
| AMCG00003843 | lama2 | coding | upstream | 412626 | 21314074 ~ 21333224 (+) |
| AMCG00003844 | lama2,LOC107653134 | coding | upstream | 449632 | 21288460 ~ 21296218 (+) |
| AMCG00003854 | NA | coding | downstream | 96860 | 21857490 ~ 21862799 (+) |
| AMCG00003855 | NA | coding | downstream | 189701 | 21950331 ~ 21958985 (+) |
| AMCG00003856 | NA | coding | downstream | 209866 | 21970496 ~ 21981590 (+) |
| AMCG00003861 | NA | coding | downstream | 340658 | 22101288 ~ 22106730 (+) |
| AMCG00003873 | NA | coding | downstream | 714457 | 22475087 ~ 22498055 (+) |
| G3767 | NA | non-coding | upstream | 13151 | 21732491 ~ 21732699 (+) |
| G3757 | NA | non-coding | upstream | 144990 | 21600632 ~ 21600860 (+) |
| G3754 | NA | non-coding | upstream | 147420 | 21595856 ~ 21598430 (+) |
| G3690 | NA | non-coding | upstream | 655596 | 21089595 ~ 21090254 (+) |
| G3670 | NA | non-coding | upstream | 818048 | 20925812 ~ 20927802 (+) |
| G3798 | NA | non-coding | downstream | 156646 | 21917276 ~ 22016452 (+) |
| G3845 | NA | non-coding | downstream | 316362 | 22076992 ~ 22077458 (+) |
| G3863 | NA | non-coding | downstream | 409710 | 22170340 ~ 22172105 (+) |
| G3871 | NA | non-coding | downstream | 422613 | 22183243 ~ 22184811 (+) |
| G3878 | NA | non-coding | downstream | 436684 | 22197314 ~ 22200678 (+) |
| G3751 | NA | other | upstream | 196317 | 21549201 ~ 21549533 (+) |
| AMCG00003828 | ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 | other | upstream | 2348164 | 19271965 ~ 19397686 (+) |
| G3108 | NA | other | upstream | 3593536 | 18146660 ~ 18152314 (+) |
| AMCG00003779 | ctsb,catb,LOC107381178 | other | upstream | 3603217 | 18131919 ~ 18142633 (+) |
| G3047 | NA | other | upstream | 4061862 | 17681817 ~ 17683988 (+) |
| AMCG00003853 | NA | other | downstream | 129893 | 21890523 ~ 21901865 (+) |
| G3799 | med23 | other | downstream | 162006 | 21922636 ~ 21923787 (+) |
| AMCG00003874 | NA | other | downstream | 922386 | 22683016 ~ 22769227 (+) |
| AMCG00003884 | NA | other | downstream | 1571971 | 23332601 ~ 23338241 (+) |
| AMCG00003891 | NA | other | downstream | 1761196 | 23521826 ~ 23533875 (+) |
