G3799 (med23)


Basic Information

Item Value
gene id G3799
gene name med23
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 21922636 ~ 21923787 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU4606
TTTAGATCCTAGGAAGAggtcaaaaataaaagcaataagcaataaaaaaagtgcCAAAACGGATGTAAAGGGACACCCTGCACAGAAGTGGAGTGTGTGAAATGGGCATACCTCTTCAGCACCACATTGAGGAGGGAATTGCCCACATCCTTCCCTGGCACAGCCAAGGCCATGAGCTCCACACAGGTGACATGGAGGGCGTGGGCTGCTGGGTTGGGAAACTCATTGAATCTCCAGTCACAGTTGGGGAAAGGGCCCGGGGACTTGCCAGCCATAGtgtcCACAAGTCGGCCAATCAGCTTGCAGTAGTACGTGTCATCTGGGATCCACGGGTTGTCCTCTCGGGCATTCATGGCACACTTCAGATAGGTCTCACTGAGGCACCAGCCGGGGGTGCGGTTCTCCTTCAGGGAGCTGATGATGGCGTGTACAAGCTTGCGCTTCAGGTTTGTCCGATCTCGCAGGTGCCTCTCATAATAATGAAGAGTGTTGTACAGATATGTCACGGGACGATC

Function

symbol description
med23 Acts upstream of or within circulatory system development; negative regulation of neurogenesis; and pigmentation. Predicted to be located in nucleus. Predicted to be part of mediator complex and transcription regulator complex. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human MED23 (mediator complex subunit 23).

NR:

description
mediator of RNA polymerase II transcription subunit 23 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4606 True 515 TUCP 0.48 2 21922636 21923787

Neighbor

gene id symbol gene type direction distance location
AMCG00003854 NA coding upstream 59837 21857490 ~ 21862799 (+)
AMCG00003847 NA coding upstream 386878 21491884 ~ 21535758 (+)
AMCG00003846 NA coding upstream 475515 21440114 ~ 21447121 (+)
AMCG00003845 NA coding upstream 483957 21348227 ~ 21438679 (+)
AMCG00003843 lama2 coding upstream 589412 21314074 ~ 21333224 (+)
AMCG00003855 NA coding downstream 26544 21950331 ~ 21958985 (+)
AMCG00003856 NA coding downstream 46709 21970496 ~ 21981590 (+)
AMCG00003861 NA coding downstream 177501 22101288 ~ 22106730 (+)
AMCG00003873 NA coding downstream 551300 22475087 ~ 22498055 (+)
AMCG00003871 NA coding downstream 589948 22513735 ~ 22523525 (+)
G3770 NA non-coding upstream 162837 21750527 ~ 21759799 (+)
G3767 NA non-coding upstream 189937 21732491 ~ 21732699 (+)
G3757 NA non-coding upstream 321776 21600632 ~ 21600860 (+)
G3754 NA non-coding upstream 324206 21595856 ~ 21598430 (+)
G3690 NA non-coding upstream 832382 21089595 ~ 21090254 (+)
G3845 NA non-coding downstream 153205 22076992 ~ 22077458 (+)
G3863 NA non-coding downstream 246553 22170340 ~ 22172105 (+)
G3871 NA non-coding downstream 259456 22183243 ~ 22184811 (+)
G3878 NA non-coding downstream 273527 22197314 ~ 22200678 (+)
G3884 NA non-coding downstream 300931 22224718 ~ 22225101 (+)
AMCG00003853 NA other upstream 20771 21890523 ~ 21901865 (+)
G3771 NA other upstream 162006 21745850 ~ 21760630 (+)
G3751 NA other upstream 373103 21549201 ~ 21549533 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other upstream 2524950 19271965 ~ 19397686 (+)
G3108 NA other upstream 3770322 18146660 ~ 18152314 (+)
AMCG00003874 NA other downstream 759229 22683016 ~ 22769227 (+)
AMCG00003884 NA other downstream 1408814 23332601 ~ 23338241 (+)
AMCG00003891 NA other downstream 1598039 23521826 ~ 23533875 (+)
AMCG00003898 LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 other downstream 1786242 23710029 ~ 23726144 (+)
AMCG00003902 NA other downstream 1914802 23838589 ~ 24042885 (+)

Expression


Co-expression Network