Gene
RNA
| Item | Value |
|---|---|
| gene id | G4130 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 23554276 ~ 23554524 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU5017 | True | 249 | lncRNA | 0.38 | 1 | 23554276 | 23554524 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003886 | sh3bgrl2,LOC107549062,LOC107701732,LOC107671851,LOC107708803,LOC107571206 | coding | downstream | 194436 | 23342244 ~ 23359840 (-) |
| AMCG00003887 | NA | coding | downstream | 220717 | 23322329 ~ 23333559 (-) |
| AMCG00003888 | rps12 | coding | downstream | 235132 | 23316206 ~ 23319144 (-) |
| AMCG00003880 | tbpl1,LOC107756392,LOC107571264,LOC107549057,LOC107701734 | coding | downstream | 464680 | 23082938 ~ 23089596 (-) |
| AMCG00003875 | NA | coding | downstream | 753047 | 22790248 ~ 22801229 (-) |
| AMCG00003895 | NA | coding | upstream | 88280 | 23642804 ~ 23653555 (-) |
| AMCG00003900 | tulp4 | coding | upstream | 206078 | 23760602 ~ 23786763 (-) |
| AMCG00003899 | NA | coding | upstream | 269253 | 23823777 ~ 23845018 (-) |
| AMCG00003901 | NA | coding | upstream | 292497 | 23847021 ~ 23852940 (-) |
| AMCG00003906 | NA | coding | upstream | 492630 | 24047154 ~ 24075283 (-) |
| G4101 | NA | non-coding | downstream | 130803 | 23399861 ~ 23423473 (-) |
| G4039 | NA | non-coding | downstream | 438591 | 23045315 ~ 23115685 (-) |
| G4000 | NA | non-coding | downstream | 697871 | 22856026 ~ 22856405 (-) |
| G3984 | NA | non-coding | downstream | 782492 | 22771572 ~ 22771784 (-) |
| G3898 | NA | non-coding | downstream | 1194180 | 22359785 ~ 22360096 (-) |
| G4174 | gtf2h5,tf2h5,LOC107659223,LOC107721375 | non-coding | upstream | 266166 | 23820690 ~ 23822698 (-) |
| G4222 | NA | non-coding | upstream | 489144 | 24043668 ~ 24046142 (-) |
| G4255 | NA | non-coding | upstream | 570327 | 24124851 ~ 24125052 (-) |
| G4256 | NA | non-coding | upstream | 574017 | 24128541 ~ 24129966 (-) |
| G4353 | NA | non-coding | upstream | 1080766 | 24635290 ~ 24635495 (-) |
| AMCG00003893 | NA | other | downstream | 20394 | 23529519 ~ 23533882 (-) |
| G3523 | NA | other | downstream | 4047523 | 19444016 ~ 19506753 (-) |
| G3517 | LOC101154678 | other | downstream | 4128910 | 19424963 ~ 19425366 (-) |
| AMCG00003825 | NA | other | downstream | 4181051 | 19361818 ~ 19373225 (-) |
| AMCG00003782 | ctsb | other | downstream | 5401895 | 18146660 ~ 18152381 (-) |
| AMCG00003896 | tmem181 | other | upstream | 186061 | 23740585 ~ 23757796 (-) |
| AMCG00003909 | NA | other | upstream | 709383 | 24263907 ~ 24296246 (-) |
| G4521 | fig4 | other | upstream | 2343410 | 25897934 ~ 25901612 (-) |
| AMCG00003946 | NA | other | upstream | 2410896 | 25965420 ~ 25998628 (-) |
| AMCG00003967 | LOC107095448 | other | upstream | 3275830 | 26830354 ~ 26869578 (-) |
