Gene
RNA
| Item | Value |
|---|---|
| gene id | G4415 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 25063554 ~ 25068242 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU5390 | True | 537 | lncRNA | 0.46 | 2 | 25063554 | 25068242 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003920 | NA | coding | downstream | 319364 | 24713229 ~ 24744190 (-) |
| AMCG00003921 | LOC105418861 | coding | downstream | 354594 | 24697071 ~ 24708960 (-) |
| AMCG00003919 | fbxo30,LOC108239090,LOC103144688,LOC102226384 | coding | downstream | 367812 | 24687213 ~ 24695742 (-) |
| AMCG00003916 | NA | coding | downstream | 379788 | 24656477 ~ 24683766 (-) |
| AMCG00003908 | NA | coding | downstream | 784574 | 24223385 ~ 24278980 (-) |
| AMCG00003927 | NA | coding | upstream | 485296 | 25553538 ~ 25558348 (-) |
| AMCG00003928 | NA | coding | upstream | 512529 | 25580771 ~ 25591487 (-) |
| AMCG00003929 | cdc40 | coding | upstream | 592088 | 25660330 ~ 25696539 (-) |
| AMCG00003942 | LOC101067178 | coding | upstream | 743078 | 25811320 ~ 25818975 (-) |
| AMCG00003940 | fig4 | coding | upstream | 779919 | 25848161 ~ 25851389 (-) |
| G4390 | NA | non-coding | downstream | 181945 | 24820841 ~ 24881609 (-) |
| G4397 | NA | non-coding | downstream | 189668 | 24868711 ~ 24873886 (-) |
| G4353 | NA | non-coding | downstream | 428059 | 24635290 ~ 24635495 (-) |
| G4256 | NA | non-coding | downstream | 933588 | 24128541 ~ 24129966 (-) |
| G4255 | NA | non-coding | downstream | 938502 | 24124851 ~ 24125052 (-) |
| G4455 | NA | non-coding | upstream | 398010 | 25466252 ~ 25467433 (-) |
| G4602 | NA | non-coding | upstream | 1209202 | 26277444 ~ 26279767 (-) |
| G4624 | sec63,LOC106940628 | non-coding | upstream | 1291615 | 26359857 ~ 26365069 (-) |
| G4660 | NA | non-coding | upstream | 1465638 | 26533880 ~ 26586892 (-) |
| G4665 | NA | non-coding | upstream | 1490627 | 26558869 ~ 26561251 (-) |
| AMCG00003909 | NA | other | downstream | 767308 | 24263907 ~ 24296246 (-) |
| AMCG00003896 | tmem181 | other | downstream | 1305758 | 23740585 ~ 23757796 (-) |
| AMCG00003893 | NA | other | downstream | 1529672 | 23529519 ~ 23533882 (-) |
| G3523 | NA | other | downstream | 5556801 | 19444016 ~ 19506753 (-) |
| G3517 | LOC101154678 | other | downstream | 5638188 | 19424963 ~ 19425366 (-) |
| G4521 | fig4 | other | upstream | 829692 | 25897934 ~ 25901612 (-) |
| AMCG00003946 | NA | other | upstream | 897178 | 25965420 ~ 25998628 (-) |
| AMCG00003967 | LOC107095448 | other | upstream | 1762112 | 26830354 ~ 26869578 (-) |
| AMCG00004006 | NA | other | upstream | 4256499 | 29324741 ~ 29329115 (-) |
| AMCG00004038 | LOC105015767 | other | upstream | 5116376 | 30184618 ~ 30220135 (-) |
