G4455


Basic Information

Item Value
gene id G4455
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 25466252 ~ 25467433 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU5435
CTCCTTACCGAGGTACTGCCGGACTTCCAGGAGAATGTGCGGGGGTCCCCCGTTCAGCTGATAGATGAGGGAGCCCAGACAGAAGAGCAGCAGCGCAGCCATGCAGCAACCATATTTCCGTGGGGAAACGCGCAGGGCGATCACCGACAGCCGGCTGCCCTTGCTGTTCCTGCTGTGGTTCGAGGTGTGACCCTTGTGCCGGGGACCGCTGCTGTGATTCTTCATCATCTCCTCCTCACATGCAGCCGCCGAGAAAGGTCGTCACCCATCCGCCTGTGCAGAGTGAAACTTTCTGCTGGGAGGTCATTGGGGAAGAAGAGTGATGTGTTCAAGAGGAATGCACAAGGTCCGCGGGACTGGAGCGAGAGGCCAGCGCTGTTTCTGTTATCTCCCTTTCCCTCAGCCCGTCTCTTTTATACGTCTGGACTGCAAATGAAGTTGGGAAACCATCCTACCCCTTCGCTTTTTAGGTTAGTCTGGTGTCGGATTACCGAAGCAGGGGGAAAAAGTTGATCAGTGCCTCGAAACGGGTGCTTTCCTGCACGACAGAGACCCCCTGTGGCGGAGAAGCGCACGACCTGATCTCCGTCAGAGTTGCGTCCAATTACAGCACAGCGGTCATGTATGCATCTGCAACTACAGTCATGGAAACTGGAAAAAGCAACATCAATCAGAAACCCACAGCCTAATATGatttgtttcaaatgtaattacttgTATAATTGTCAAacgtgtagaattgagaacaagggcagtaatgttgagactgtattattattattattattattattattattattattattattattattatttcttggcagacacccttatccagggtgacttacaacataagtgcaaaacaaagtgcaaaaatacagtgaagtaaaaggcatcaatcattacaaattcaattaatctaaacatagcaattcaaaatacattttacaaattccaatttacaatttaaacaagcaagtacagtaagtgaggtcctacatcctggacggtgaaagctaagtgctgtcaagatgttgggtcacagtcaggggctacgggaaagggagcaaggaggaaaacaatcaagaacgcgagaagcaaataaaactgtgaagtgctatctagcagggatagaggactaatattacaagtaaaGATGTatcttgagtaagtgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5435 True 1182 lncRNA 0.46 1 25466252 25467433

Neighbor

gene id symbol gene type direction distance location
AMCG00003920 NA coding downstream 722062 24713229 ~ 24744190 (-)
AMCG00003921 LOC105418861 coding downstream 757292 24697071 ~ 24708960 (-)
AMCG00003919 fbxo30,LOC108239090,LOC103144688,LOC102226384 coding downstream 770510 24687213 ~ 24695742 (-)
AMCG00003916 NA coding downstream 782486 24656477 ~ 24683766 (-)
AMCG00003908 NA coding downstream 1187272 24223385 ~ 24278980 (-)
AMCG00003927 NA coding upstream 86105 25553538 ~ 25558348 (-)
AMCG00003928 NA coding upstream 113338 25580771 ~ 25591487 (-)
AMCG00003929 cdc40 coding upstream 192897 25660330 ~ 25696539 (-)
AMCG00003942 LOC101067178 coding upstream 343887 25811320 ~ 25818975 (-)
AMCG00003940 fig4 coding upstream 380728 25848161 ~ 25851389 (-)
G4415 NA non-coding downstream 398010 25063554 ~ 25068242 (-)
G4390 NA non-coding downstream 584643 24820841 ~ 24881609 (-)
G4397 NA non-coding downstream 592366 24868711 ~ 24873886 (-)
G4353 NA non-coding downstream 830757 24635290 ~ 24635495 (-)
G4256 NA non-coding downstream 1336286 24128541 ~ 24129966 (-)
G4602 NA non-coding upstream 810011 26277444 ~ 26279767 (-)
G4624 sec63,LOC106940628 non-coding upstream 892424 26359857 ~ 26365069 (-)
G4660 NA non-coding upstream 1066447 26533880 ~ 26586892 (-)
G4665 NA non-coding upstream 1091436 26558869 ~ 26561251 (-)
G4727 NA non-coding upstream 1290918 26758351 ~ 26758880 (-)
AMCG00003909 NA other downstream 1170006 24263907 ~ 24296246 (-)
AMCG00003896 tmem181 other downstream 1708456 23740585 ~ 23757796 (-)
AMCG00003893 NA other downstream 1932370 23529519 ~ 23533882 (-)
G3523 NA other downstream 5959499 19444016 ~ 19506753 (-)
G3517 LOC101154678 other downstream 6040886 19424963 ~ 19425366 (-)
G4521 fig4 other upstream 430501 25897934 ~ 25901612 (-)
AMCG00003946 NA other upstream 497987 25965420 ~ 25998628 (-)
AMCG00003967 LOC107095448 other upstream 1362921 26830354 ~ 26869578 (-)
AMCG00004006 NA other upstream 3857308 29324741 ~ 29329115 (-)
AMCG00004038 LOC105015767 other upstream 4717185 30184618 ~ 30220135 (-)

Expression


Co-expression Network