G4482


Basic Information

Item Value
gene id G4482
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 25610078 ~ 25610296 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU5466
gattagaggagtcacttctaactggagtgaggttgttagtggagatccacagggatcagtactagggcctttgctttttctaatctatattaatgatctggactctgggatagttagcaaacttgtcaaatttgcagattatactaaaataggtggctcagcagatacaatcttggcagcacaggctattcagagggacttagataatattcagttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5466 True 219 lncRNA 0.40 1 25610078 25610296

Neighbor

gene id symbol gene type direction distance location
AMCG00003935 ust,LOC106607986 coding upstream 61456 25518913 ~ 25548622 (+)
AMCG00003932 NA coding upstream 150127 25425817 ~ 25459951 (+)
AMCG00003936 NA coding upstream 453853 25155707 ~ 25156225 (+)
AMCG00003924 stxbp5a,LOC107710208,LOC108436475,LOC107726399,LOC107696120 coding upstream 472818 25092384 ~ 25137260 (+)
AMCG00003923 NA coding upstream 643711 24884196 ~ 24966367 (+)
AMCG00003934 NA coding downstream 22228 25632524 ~ 25645301 (+)
AMCG00003933 wasf1,LOC106607981 coding downstream 125419 25735715 ~ 25747441 (+)
AMCG00003931 wasf1,LOC106571806,LOC107739187 coding downstream 153687 25763983 ~ 25767788 (+)
AMCG00003939 NA coding downstream 294089 25904385 ~ 25915025 (+)
AMCG00003938 NA coding downstream 305124 25915420 ~ 25927139 (+)
G4452 NA non-coding upstream 55989 25481598 ~ 25554089 (+)
G4362 NA non-coding upstream 922941 24685016 ~ 24687137 (+)
G4359 epm2a non-coding upstream 945895 24663939 ~ 24664183 (+)
G4358 epm2a non-coding upstream 947297 24657907 ~ 24662781 (+)
G4354 NA non-coding upstream 962323 24647509 ~ 24647755 (+)
G4512 fig4b,fig4 non-coding downstream 203995 25814291 ~ 25888313 (+)
G4526 NA non-coding downstream 319171 25929467 ~ 25929680 (+)
G4536 NA non-coding downstream 333847 25944143 ~ 25944352 (+)
G4589 NA non-coding downstream 615197 26225493 ~ 26227500 (+)
G4590 NA non-coding downstream 618632 26228928 ~ 26229252 (+)
G4360 NA other upstream 926158 24683400 ~ 24683920 (+)
AMCG00003910 zbtb2b other upstream 1480186 24118384 ~ 24129892 (+)
AMCG00003902 NA other upstream 1567193 23838589 ~ 24042885 (+)
AMCG00003898 LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 other upstream 1883934 23710029 ~ 23726144 (+)
AMCG00003891 NA other upstream 2076203 23521826 ~ 23533875 (+)
AMCG00003930 wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 other downstream 174877 25785173 ~ 25795795 (+)
AMCG00003948 sesn1,LOC102782344 other downstream 470987 26081283 ~ 26085122 (+)
AMCG00003962 NA other downstream 972371 26582667 ~ 26586892 (+)
G4831 NA other downstream 2452067 28062363 ~ 28103211 (+)
AMCG00003988 NA other downstream 2769515 28379811 ~ 28399741 (+)

Expression


Co-expression Network