G4594


Basic Information

Item Value
gene id G4594
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 26255789 ~ 26256106 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU5613
TATAGAAATGGACAACATACATCTGTATAGTATGACTTTAAACTGGATTAGAACCTTTTGACTTTCCACCATGTTTGCCACCATCATCCTCACCTTTGACATAAAACTTGGGGGAGTGTTGCTGTATCCCTTTAGGTGCTTTTGAAAGCAGTCTAGCTGAAGAAGCACAGATCTTTGTTGCTCATCTGCTCTCAGCACTCCCGCTCTGATAAGACTGTCATATTGCTCCAACGGGCCACTGAAGCTGGAAGCACTAAAGGCTGCCTGGCTTTCAACAACCTGAAGAGCTGCTGGTTTTGCTGCATGTACTGTATAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5613 True 318 lncRNA 0.40 1 26255789 26256106

Neighbor

gene id symbol gene type direction distance location
AMCG00003947 NA coding upstream 235964 26019544 ~ 26019825 (+)
AMCG00003944 NA coding upstream 290540 25946643 ~ 25965249 (+)
AMCG00003943 NA coding upstream 312742 25939882 ~ 25943047 (+)
AMCG00003937 NA coding upstream 317460 25933027 ~ 25938329 (+)
AMCG00003938 NA coding upstream 328650 25915420 ~ 25927139 (+)
AMCG00003954 NA coding downstream 1320 26257426 ~ 26257668 (+)
AMCG00003949 snx3 coding downstream 16313 26272419 ~ 26279485 (+)
AMCG00003956 NA coding downstream 63661 26319767 ~ 26328027 (+)
AMCG00003955 NA coding downstream 78527 26334633 ~ 26339261 (+)
AMCG00003958 sec63 coding downstream 83742 26339848 ~ 26365099 (+)
G4593 NA non-coding upstream 11152 26244247 ~ 26244637 (+)
G4592 NA non-coding upstream 11735 26243662 ~ 26244054 (+)
G4590 NA non-coding upstream 26537 26228928 ~ 26229252 (+)
G4589 NA non-coding upstream 28289 26225493 ~ 26227500 (+)
G4536 NA non-coding upstream 311437 25944143 ~ 25944352 (+)
G4595 NA non-coding downstream 675 26256781 ~ 26257025 (+)
G4694 NA non-coding downstream 395179 26651285 ~ 26651567 (+)
G4787 NA non-coding downstream 1025898 27282004 ~ 27282241 (+)
G4804 NA non-coding downstream 1327465 27583571 ~ 27584034 (+)
G4806 NA non-coding downstream 1465354 27721460 ~ 27776442 (+)
AMCG00003948 sesn1,LOC102782344 other upstream 170667 26081283 ~ 26085122 (+)
AMCG00003930 wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 other upstream 459994 25785173 ~ 25795795 (+)
G4360 NA other upstream 1571869 24683400 ~ 24683920 (+)
AMCG00003910 zbtb2b other upstream 2125897 24118384 ~ 24129892 (+)
AMCG00003902 NA other upstream 2212904 23838589 ~ 24042885 (+)
AMCG00003962 NA other downstream 326561 26582667 ~ 26586892 (+)
G4831 NA other downstream 1806257 28062363 ~ 28103211 (+)
AMCG00003988 NA other downstream 2123705 28379811 ~ 28399741 (+)
AMCG00003990 NA other downstream 2198313 28454419 ~ 28465646 (+)
AMCG00003991 NA other downstream 2312078 28568184 ~ 28585674 (+)

Expression


Co-expression Network