Gene
RNA
| Item | Value |
|---|---|
| gene id | G464 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 3086465 ~ 3111051 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU568 | True | 317 | lncRNA | 0.37 | 2 | 3086465 | 3111051 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003431 | galnt14,LOC106607829,LOC106571428,LOC108429358,LOC107676246 | coding | downstream | 360546 | 2674158 ~ 2725919 (-) |
| AMCG00003426 | NA | coding | downstream | 563140 | 2507558 ~ 2523325 (-) |
| AMCG00003424 | NA | coding | downstream | 670514 | 2408054 ~ 2415951 (-) |
| AMCG00003418 | NA | coding | downstream | 749405 | 2330695 ~ 2337060 (-) |
| AMCG00003417 | NA | coding | downstream | 783052 | 2295450 ~ 2303413 (-) |
| AMCG00003435 | NA | coding | upstream | 102760 | 3213811 ~ 3217086 (-) |
| AMCG00003437 | NA | coding | upstream | 128833 | 3239884 ~ 3250722 (-) |
| AMCG00003436 | NA | coding | upstream | 178986 | 3290037 ~ 3291227 (-) |
| AMCG00003440 | NA | coding | upstream | 287675 | 3398726 ~ 3400684 (-) |
| AMCG00003439 | NA | coding | upstream | 293919 | 3404970 ~ 3415285 (-) |
| G458 | NA | non-coding | downstream | 28261 | 3006968 ~ 3058204 (-) |
| G453 | NA | non-coding | downstream | 80784 | 3005372 ~ 3005681 (-) |
| G372 | NA | non-coding | downstream | 680381 | 2405643 ~ 2406084 (-) |
| G345 | LOC107575789 | non-coding | downstream | 739056 | 2347062 ~ 2347409 (-) |
| G322 | NA | non-coding | downstream | 999707 | 2086458 ~ 2086758 (-) |
| G500 | NA | non-coding | upstream | 84854 | 3195905 ~ 3211877 (-) |
| G541 | ccdc25 | non-coding | upstream | 313037 | 3424088 ~ 3428291 (-) |
| G578 | NA | non-coding | upstream | 412973 | 3524024 ~ 3525095 (-) |
| G586 | mtmr9 | non-coding | upstream | 485870 | 3596921 ~ 3599589 (-) |
| G624 | NA | non-coding | upstream | 751946 | 3862997 ~ 3865429 (-) |
| AMCG00003422 | NA | other | downstream | 647644 | 2427397 ~ 2438821 (-) |
| AMCG00003423 | NA | other | downstream | 684570 | 2397642 ~ 2401895 (-) |
| AMCG00003400 | abracl,LOC107727609,LOC107558932,LOC107553474 | other | downstream | 2129269 | 945223 ~ 957196 (-) |
| G531 | adck3,coq8a,LOC107602173,LOC107675039,LOC107727627 | other | upstream | 283606 | 3394657 ~ 3430272 (-) |
| AMCG00003444 | NA | other | upstream | 425121 | 3536172 ~ 3538967 (-) |
| AMCG00003459 | NA | other | upstream | 765181 | 3876232 ~ 3895524 (-) |
| AMCG00003476 | NA | other | upstream | 1472091 | 4583142 ~ 4808989 (-) |
| AMCG00003484 | NA | other | upstream | 2233019 | 5344070 ~ 5356468 (-) |
