G4782


Basic Information

Item Value
gene id G4782
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 26964760 ~ 26965399 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU5838
attattattattattattattattaattcaatatcACTTCCAAAGTAATTATATAGGCATTCTGCATGGATAACTTAATTACtcttcaaatatcaaatatttttataacCAACAGGCTATAACTGATCAAACATTATGATCATTCCACATTTACCAATACTATCtcagcatatttatttatttcagtttatgtAGTCTGTACTGGTAAGAAACAGAccacatattaatatataaccCATTTGCCATCCATGGACTGCTTGGTTTATACTGTGCTATATTGGATGTGTTCCTGCAATCTGAGATTTCAGTGCATTGCAATATTCTAGTTATATTTCTTATGAGTGTGGAAACCATATAGTAGgttattcaaacaaaaaatgttttggagaaAATGAAGTGCATTTGACTTTTCTACAAACCTGCAAAGATAACCAGGATAAATCATACCAGGGGctgcattttaatatcactttaactTTCAAAATAGAGAAAAGATTCACTTTTATTTTGCCAACAAGCAATCTTAAATAtgatgtgtaataaataaatgcaggcAGATGGTTTGGGAAAATGTTCCAGTGCAATATCAATTAGTGAATTGGGTAAATCCAGTGAATGTGTTTGCATACTGTGTCAAAGt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5838 True 640 lncRNA 0.30 1 26964760 26965399

Neighbor

gene id symbol gene type direction distance location
AMCG00003970 NA coding downstream 7132 26940038 ~ 26957628 (-)
AMCG00003968 NA coding downstream 192844 26771294 ~ 26771916 (-)
AMCG00003966 NA coding downstream 280925 26651906 ~ 26683835 (-)
AMCG00003965 NA coding downstream 331057 26624640 ~ 26633703 (-)
AMCG00003961 NA coding downstream 383306 26576136 ~ 26581454 (-)
AMCG00003974 NA coding upstream 323 26965722 ~ 26968015 (-)
AMCG00003975 ascc3 coding upstream 40574 27005973 ~ 27040898 (-)
AMCG00003976 NA coding upstream 269920 27235319 ~ 27254865 (-)
AMCG00003979 NA coding upstream 667681 27633080 ~ 27635364 (-)
AMCG00003978 hace1 coding upstream 1033434 27998833 ~ 28041357 (-)
G4752 NA non-coding downstream 132349 26791158 ~ 26832411 (-)
G4727 NA non-coding downstream 205880 26758351 ~ 26758880 (-)
G4660 NA non-coding downstream 377868 26533880 ~ 26586892 (-)
G4665 NA non-coding downstream 403509 26558869 ~ 26561251 (-)
G4624 sec63,LOC106940628 non-coding downstream 599691 26359857 ~ 26365069 (-)
G4829 NA non-coding upstream 1084140 28049539 ~ 28058411 (-)
G4838 NA non-coding upstream 1139210 28104609 ~ 28104980 (-)
G4900 NA non-coding upstream 1402600 28367999 ~ 28369982 (-)
G4921 NA non-coding upstream 1504175 28469574 ~ 28469852 (-)
G4922 NA non-coding upstream 1504791 28470190 ~ 28470417 (-)
AMCG00003967 LOC107095448 other downstream 95182 26830354 ~ 26869578 (-)
AMCG00003946 NA other downstream 966132 25965420 ~ 25998628 (-)
G4521 fig4 other downstream 1063148 25897934 ~ 25901612 (-)
AMCG00003909 NA other downstream 2668514 24263907 ~ 24296246 (-)
AMCG00003896 tmem181 other downstream 3206964 23740585 ~ 23757796 (-)
AMCG00004006 NA other upstream 2359342 29324741 ~ 29329115 (-)
AMCG00004038 LOC105015767 other upstream 3219219 30184618 ~ 30220135 (-)
AMCG00004041 NA other upstream 3308407 30273806 ~ 30276227 (-)
AMCG00004052 NA other upstream 3848382 30813781 ~ 30894824 (-)
AMCG00004060 NA other upstream 4004280 30969679 ~ 30973496 (-)

Expression


Co-expression Network