G4808


Basic Information

Item Value
gene id G4808
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 27777290 ~ 27777659 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU5870
cacccaagtcatggtggtggcaaaatgctattggttggaaggaaaccttataaaagggaaaacaaagagaatttgagttattttaaattcttcatcctgcaacgagacacaagacagagctggagaggagagacagagagagacacaccacttcctgcctgaccagactggcctataagctgtactgtgaggagaaagaagaaaatgggtattatctgtttcttactgtaatccagcagaagcttaatattacttattttcagtaatataattgaatgatattagtttcctatttttgtcaaaataaatgattattgcacatctgtgtcttgaccgcatcttccctctaaaaagaatcttaaaagagaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5870 True 370 lncRNA 0.46 1 27777290 27777659

Neighbor

gene id symbol gene type direction distance location
AMCG00003973 grik2,LOC103365520,LOC107103501,LOC105917636 coding upstream 271141 27492506 ~ 27506149 (+)
AMCG00003972 grik2,LOC107667969 coding upstream 327396 27430090 ~ 27449894 (+)
AMCG00003977 grik2,LOC101466412,LOC102291713,LOC102207761,LOC107740554 coding upstream 395288 27380559 ~ 27382002 (+)
AMCG00003971 NA coding upstream 897425 26878702 ~ 26879865 (+)
AMCG00003969 NA coding upstream 1022875 26721890 ~ 26754415 (+)
AMCG00003980 NA coding downstream 284896 28062555 ~ 28094602 (+)
AMCG00003982 NA coding downstream 320401 28098060 ~ 28098326 (+)
AMCG00003983 NA coding downstream 482037 28259696 ~ 28275388 (+)
AMCG00003985 NA coding downstream 576856 28354515 ~ 28369974 (+)
AMCG00003989 NA coding downstream 595487 28373146 ~ 28379173 (+)
G4806 NA non-coding upstream 848 27721460 ~ 27776442 (+)
G4804 NA non-coding upstream 193256 27583571 ~ 27584034 (+)
G4787 NA non-coding upstream 495049 27282004 ~ 27282241 (+)
G4694 NA non-coding upstream 1125723 26651285 ~ 26651567 (+)
G4595 NA non-coding upstream 1520265 26256781 ~ 26257025 (+)
G4837 NA non-coding downstream 326551 28104210 ~ 28105707 (+)
G4917 NA non-coding downstream 689258 28466917 ~ 28468944 (+)
G4981 NA non-coding downstream 1115025 28892684 ~ 28893031 (+)
G5005 NA non-coding downstream 1174894 28952553 ~ 28953065 (+)
G5085 NA non-coding downstream 1576862 29354521 ~ 29361679 (+)
AMCG00003962 NA other upstream 1190398 26582667 ~ 26586892 (+)
AMCG00003948 sesn1,LOC102782344 other upstream 1692168 26081283 ~ 26085122 (+)
AMCG00003930 wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 other upstream 1981495 25785173 ~ 25795795 (+)
G4360 NA other upstream 3093370 24683400 ~ 24683920 (+)
AMCG00003910 zbtb2b other upstream 3647398 24118384 ~ 24129892 (+)
G4831 NA other downstream 284704 28062363 ~ 28103211 (+)
AMCG00003988 NA other downstream 602152 28379811 ~ 28399741 (+)
AMCG00003990 NA other downstream 676760 28454419 ~ 28465646 (+)
AMCG00003991 NA other downstream 790525 28568184 ~ 28585674 (+)
AMCG00003993 NA other downstream 862515 28640174 ~ 28683981 (+)

Expression


Co-expression Network