G5185


Basic Information

Item Value
gene id G5185
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 30108841 ~ 30109040 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU6346
gaacaaaaaggtaatgTCCTTCAGTGGCCCATGAAGAGCCCAAAATCTGTGGCATGaattgaagattgctgtccatcaacactccccaagAATATAACAGAACTTGAACAGTATTgtaagaagaatggtcaaatattgtcaaatctaggtgtgcaaagttgatAAAGATCTATCCCAACAAACTCACTgtagacttatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6346 True 200 lncRNA 0.41 1 30108841 30109040

Neighbor

gene id symbol gene type direction distance location
AMCG00004027 NA coding upstream 11121 30094302 ~ 30097720 (+)
AMCG00004023 NA coding upstream 110157 29983613 ~ 29998684 (+)
AMCG00004013 NA coding upstream 427247 29663803 ~ 29681594 (+)
AMCG00004012 NA coding upstream 482323 29613189 ~ 29626518 (+)
AMCG00004015 NA coding upstream 497311 29600561 ~ 29611530 (+)
AMCG00004024 rwdd1,LOC107587776,LOC107704860,LOC106579327 coding downstream 2046 30111086 ~ 30114969 (+)
AMCG00004026 NA coding downstream 22196 30131236 ~ 30137944 (+)
AMCG00004025 NA coding downstream 48322 30157362 ~ 30167872 (+)
AMCG00004029 cssa15h12orf57,grcc10,clg18h12orf57,csgr04h12orf57,c7h12orf57,LOC107695984,LOC105901913,LOC103359244 coding downstream 92148 30201188 ~ 30202790 (+)
AMCG00004030 NA coding downstream 117593 30226633 ~ 30229627 (+)
G5141 pou3f2,LOC106584047,LOC106605033 non-coding upstream 409617 29697667 ~ 29699224 (+)
G5129 NA non-coding upstream 423298 29684227 ~ 29685543 (+)
G5085 NA non-coding upstream 747162 29354521 ~ 29361679 (+)
G5005 NA non-coding upstream 1155776 28952553 ~ 28953065 (+)
G4981 NA non-coding upstream 1215810 28892684 ~ 28893031 (+)
G5191 NA non-coding downstream 13055 30122095 ~ 30123181 (+)
G5198 NA non-coding downstream 36815 30145855 ~ 30146557 (+)
G5248 NA non-coding downstream 166068 30275108 ~ 30276282 (+)
G5271 NA non-coding downstream 436247 30545287 ~ 30545525 (+)
G5272 NA non-coding downstream 443937 30552977 ~ 30553214 (+)
AMCG00004011 ccnc other upstream 567483 29527414 ~ 29541358 (+)
AMCG00003993 NA other upstream 1424860 28640174 ~ 28683981 (+)
AMCG00003991 NA other upstream 1523167 28568184 ~ 28585674 (+)
AMCG00003990 NA other upstream 1643195 28454419 ~ 28465646 (+)
AMCG00003988 NA other upstream 1709100 28379811 ~ 28399741 (+)
G5245 NA other downstream 162170 30271210 ~ 30271524 (+)
AMCG00004039 NA other downstream 187827 30296867 ~ 30307175 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other downstream 778955 30887995 ~ 30894827 (+)
AMCG00004079 NA other downstream 2291365 32400405 ~ 32402383 (+)
G5642 NA other downstream 3021080 33130120 ~ 33131186 (+)

Expression


Co-expression Network