G531 (adck3,coq8a,LOC107602173,LOC107675039,LOC107727627)


Basic Information

Item Value
gene id G531
gene name adck3,coq8a,LOC107602173,LOC107675039,LOC107727627
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 3394657 ~ 3430272 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU643
tttttattttccaagatcatttacattttattttcatacctCATCTTACAAGTAGCATCTTTAATCTGAACATTAAAAATCCATCTCCATCGTAGCACTCAGATAATAAAATCTCAGTCATATAAGGACTGAATATTTCTTGGATCCCTGACCTTTTATTCGAATAGGCACATCTCCATTGCGTCCACAAAAACTTAGCTACAAAGCTCtacaatcattttgttttgattaatgatttttgatccttacaaaaaaagtcaagcattcaaaaagagaaagaaaaattacAGCATACAAATTTTATTCCTCAGTACCACAGTATTTTAACAACTAACAAATATACAATCCTGCAATGATTGCCTTTGATCATGTGACGTAAAGAAGCAAAGCAACCACCGGTTAACAAGCACAATAGGCTTTTAAAGCCCAATAAAAGTTTTAAGTACTAAACAGATTCCTAGTTTAAGCAGGTATTAAAattgagagaagagagagaaaaaaaaaagtaatatattaaagAGAAAGGCAGGCtttggaaataataatgaatcaaaTGAACCTACCACttcaaaaagaacaacaacaaaaaaaaaaaaactaaacaaaagcaaaaacaacaggaatCCCCTCCATCATCACCAGATAATTCTTCCAATAACATCACAAAGTGAGCCTTTCCATCTTTTACAGAACTGAAAACGGACAATGACCTTCAAAACGTTTCTGCTccattttcttgctttttttctATATACCTCAGGAATTGCAGTGTGTCTCAACTCAAAACTCATATCGTATGTGCGTAGTACAAAACTGTCTGTCATTAGAAGTTTGTGAATCAGATGCCTTCTGCATACGCTGGCACAAAAGAATAACGTTGTTCTttgcctttcattttgttttcctccctgCTGAAAACAGATGATTCAGTTTGGCCTGAAATTGTTCAGACATGAATGCACCAcccaaatatattattaacaagTTAATGGGGGAGAGTGAATgcatcatttaaacaaatactaaCCCTCTCATGTTTGGGGCATTATACATTAATTGTGATTTGGCGTTTCTGATCTTGGGTGATGCCAACATGTccaaacaattataaaaaatgaaaaacctcaCTCAAGTTAATCATTTTCAAACTAATGCCACGGAACTTCCCCCTTGAACTCAGTTTCATGCACAGTTCTGCAgtcttatttattgttttgcttgCAACATAACAAATCATCCTCCCCCCTTCCAAGTGTCGAATTGAACAAAAGCCTTTCTTTGCTGAGTGCGTCCATTGACAGTGATTGAAGGACAAAATGTTAACCAGAGGCAAATGTTAAACGTGCTCCTTACAAACTCCTACAGCAGAAGGATGGGAGAATGGAGGAAAaacagaggaggaaaaaaagtgcCAATTTACATTCAACAGACAGGCCTGGACAGGGCTCAGTAAAACTCTCCAAACTCTCCCTAGTTCAGCCTGCCCCGATGTGGGATTCCTCACTCTCCATGTGCTTCGGTGTCGGGCGTTGCCAGTCACTCGCTTGGTCCGTTTTTCCTGTCGTTCCAGTACTTGTCGTAGGCATGATCGAACATGTCCTTGCAGCAGAGCTTGGCTTTCAGCCGGGAGCAGATGAGGAAGGAGCCGCCCATCTTGCGGTGCAGGGAGTAGGTTTCTTCTGGCGGGGGGGACAGCCGCTGCTTCAACATCACGGGGATGAGGTTGTGGATGCGCTGGGTGGTGCTCTGGGAGCCAAAGTCAAAGGGCACTTGCGAAGCGAACGCCTCCCCCAGGATCATCACTGCGTCCACGTGAGCATTCTCCA

Function

symbol description
coq8a Enables ADP binding activity and kinase activity. Involved in phosphorylation and ubiquinone biosynthetic process. Located in mitochondrion. Implicated in primary coenzyme Q10 deficiency 4.

NR:

description
PREDICTED: atypical kinase ADCK3, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU643 True 1826 TUCP 0.64 2 3394657 3430272

Neighbor

gene id symbol gene type direction distance location
AMCG00003436 NA coding downstream 103430 3290037 ~ 3291227 (-)
AMCG00003437 NA coding downstream 143935 3239884 ~ 3250722 (-)
AMCG00003435 NA coding downstream 177571 3213811 ~ 3217086 (-)
AMCG00003431 galnt14,LOC106607829,LOC106571428,LOC108429358,LOC107676246 coding downstream 668738 2674158 ~ 2725919 (-)
AMCG00003426 NA coding downstream 871332 2507558 ~ 2523325 (-)
AMCG00003443 NA coding upstream 36530 3466802 ~ 3536015 (-)
AMCG00003449 NA coding upstream 278841 3709113 ~ 3714240 (-)
AMCG00003451 NA coding upstream 422875 3853147 ~ 3855295 (-)
AMCG00003461 NA coding upstream 661820 4092092 ~ 4120379 (-)
AMCG00003464 NA coding upstream 779475 4209747 ~ 4211902 (-)
G500 NA non-coding downstream 182780 3195905 ~ 3211877 (-)
G464 NA non-coding downstream 283606 3086465 ~ 3111051 (-)
G458 NA non-coding downstream 336453 3006968 ~ 3058204 (-)
G453 NA non-coding downstream 388976 3005372 ~ 3005681 (-)
G372 NA non-coding downstream 988573 2405643 ~ 2406084 (-)
G578 NA non-coding upstream 93752 3524024 ~ 3525095 (-)
G586 mtmr9 non-coding upstream 166649 3596921 ~ 3599589 (-)
G624 NA non-coding upstream 432725 3862997 ~ 3865429 (-)
G664 NA non-coding upstream 490724 3920996 ~ 3974710 (-)
G667 NA non-coding upstream 545485 3975757 ~ 3975989 (-)
AMCG00003422 NA other downstream 955836 2427397 ~ 2438821 (-)
AMCG00003423 NA other downstream 992762 2397642 ~ 2401895 (-)
AMCG00003400 abracl,LOC107727609,LOC107558932,LOC107553474 other downstream 2437461 945223 ~ 957196 (-)
AMCG00003444 NA other upstream 105900 3536172 ~ 3538967 (-)
AMCG00003459 NA other upstream 445960 3876232 ~ 3895524 (-)
AMCG00003476 NA other upstream 1152870 4583142 ~ 4808989 (-)
AMCG00003484 NA other upstream 1913798 5344070 ~ 5356468 (-)
AMCG00003550 NA other upstream 5578845 9009117 ~ 9082850 (-)

Expression


Co-expression Network