Gene
RNA
| Item | Value |
|---|---|
| gene id | G5465 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 31386584 ~ 31387033 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: transmembrane protease serine 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU6698 | True | 450 | lncRNA | 0.45 | 1 | 31386584 | 31387033 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004072 | NA | coding | downstream | 65990 | 31319595 ~ 31320594 (-) |
| AMCG00004070 | NA | coding | downstream | 295277 | 31076913 ~ 31091307 (-) |
| AMCG00004069 | NA | coding | downstream | 310911 | 31067311 ~ 31075673 (-) |
| AMCG00004068 | NA | coding | downstream | 364419 | 31013145 ~ 31022165 (-) |
| AMCG00004063 | eprs,LOC107679779,LOC107732550,LOC107662594 | coding | downstream | 430698 | 30950855 ~ 30955886 (-) |
| AMCG00004074 | NA | coding | upstream | 150875 | 31537908 ~ 31539407 (-) |
| AMCG00004073 | lrfn2,LOC106597048,LOC106582474 | coding | upstream | 171650 | 31558683 ~ 31568015 (-) |
| AMCG00004077 | supt7l,LOC107656753,LOC107726086,LOC107553729,LOC107737450,LOC107697525 | coding | upstream | 944293 | 32331326 ~ 32333781 (-) |
| AMCG00004076 | NA | coding | upstream | 962920 | 32349953 ~ 32363126 (-) |
| AMCG00004091 | daam2 | coding | upstream | 1226063 | 32613096 ~ 32650701 (-) |
| G5463 | LOC108443926,LOC105894840 | non-coding | downstream | 15175 | 31370000 ~ 31371409 (-) |
| G5432 | NA | non-coding | downstream | 396484 | 30988872 ~ 30990100 (-) |
| G5393 | NA | non-coding | downstream | 427470 | 30890186 ~ 30959114 (-) |
| G5387 | NA | non-coding | downstream | 540283 | 30843678 ~ 30846301 (-) |
| G5333 | NA | non-coding | downstream | 573001 | 30813295 ~ 30813583 (-) |
| G5467 | NA | non-coding | upstream | 146914 | 31533947 ~ 31534379 (-) |
| G5476 | NA | non-coding | upstream | 284330 | 31671363 ~ 31671579 (-) |
| G5483 | NA | non-coding | upstream | 399301 | 31786334 ~ 31786944 (-) |
| G5491 | NA | non-coding | upstream | 641920 | 32028953 ~ 32029406 (-) |
| G5494 | NA | non-coding | upstream | 804287 | 32191320 ~ 32191542 (-) |
| AMCG00004060 | NA | other | downstream | 413088 | 30969679 ~ 30973496 (-) |
| AMCG00004052 | NA | other | downstream | 491760 | 30813781 ~ 30894824 (-) |
| AMCG00004041 | NA | other | downstream | 1110357 | 30273806 ~ 30276227 (-) |
| AMCG00004038 | LOC105015767 | other | downstream | 1166449 | 30184618 ~ 30220135 (-) |
| AMCG00004006 | NA | other | downstream | 2057469 | 29324741 ~ 29329115 (-) |
| G5502 | NA | other | upstream | 922447 | 32309480 ~ 32309910 (-) |
| G5540 | NA | other | upstream | 1020769 | 32407802 ~ 32426563 (-) |
| G5566 | NA | other | upstream | 1206594 | 32593627 ~ 32596407 (-) |
| AMCG00004102 | NA | other | upstream | 2179053 | 33566086 ~ 33567325 (-) |
| AMCG00004116 | NA | other | upstream | 2488408 | 33875441 ~ 33918321 (-) |
