Gene
RNA
| Item | Value |
|---|---|
| gene id | G5527 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 32383409 ~ 32383679 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU6771 | True | 271 | lncRNA | 0.47 | 1 | 32383409 | 32383679 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004075 | NA | coding | upstream | 36814 | 32335392 ~ 32346595 (+) |
| AMCG00004078 | NA | coding | upstream | 54237 | 32305491 ~ 32329172 (+) |
| AMCG00004071 | LOC105894840,LOC108443926 | coding | upstream | 1012251 | 31370382 ~ 31371158 (+) |
| AMCG00004066 | NA | coding | upstream | 1320700 | 31047145 ~ 31062709 (+) |
| AMCG00004067 | NA | coding | upstream | 1343672 | 31030418 ~ 31039737 (+) |
| AMCG00004080 | bre | coding | downstream | 44780 | 32428459 ~ 32428913 (+) |
| AMCG00004083 | bre,LOC104968080 | coding | downstream | 65728 | 32449407 ~ 32455846 (+) |
| AMCG00004081 | bre | coding | downstream | 115794 | 32499473 ~ 32529839 (+) |
| AMCG00004082 | NA | coding | downstream | 175300 | 32558979 ~ 32559365 (+) |
| AMCG00004086 | NA | coding | downstream | 187900 | 32571579 ~ 32582699 (+) |
| G5522 | NA | non-coding | upstream | 33306 | 32348390 ~ 32350103 (+) |
| G5501 | NA | non-coding | upstream | 73497 | 32309505 ~ 32309912 (+) |
| G5499 | NA | non-coding | upstream | 114338 | 32268748 ~ 32269071 (+) |
| G5493 | NA | non-coding | upstream | 191867 | 32191320 ~ 32191542 (+) |
| G5490 | NA | non-coding | upstream | 354108 | 32029004 ~ 32029301 (+) |
| G5529 | NA | non-coding | downstream | 756 | 32384435 ~ 32387535 (+) |
| G5569 | NA | non-coding | downstream | 228154 | 32611833 ~ 32612051 (+) |
| G5662 | NA | non-coding | downstream | 1054649 | 33438328 ~ 33445420 (+) |
| G5680 | NA | non-coding | downstream | 1089357 | 33473036 ~ 33473330 (+) |
| G5681 | NA | non-coding | downstream | 1091163 | 33474842 ~ 33475047 (+) |
| AMCG00004056 | ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 | other | upstream | 1488582 | 30887995 ~ 30894827 (+) |
| AMCG00004039 | NA | other | upstream | 2076234 | 30296867 ~ 30307175 (+) |
| G5245 | NA | other | upstream | 2111885 | 30271210 ~ 30271524 (+) |
| AMCG00004011 | ccnc | other | upstream | 2842051 | 29527414 ~ 29541358 (+) |
| AMCG00003993 | NA | other | upstream | 3699428 | 28640174 ~ 28683981 (+) |
| AMCG00004079 | NA | other | downstream | 16726 | 32400405 ~ 32402383 (+) |
| G5642 | NA | other | downstream | 746441 | 33130120 ~ 33131186 (+) |
| AMCG00004138 | fkbp1b | other | downstream | 2469184 | 34852863 ~ 34870320 (+) |
| AMCG00004158 | NA | other | downstream | 3368771 | 35752450 ~ 35766180 (+) |
| AMCG00004160 | LOC106571404,LOC106607809,LOC105897019 | other | downstream | 3643600 | 36027279 ~ 36045282 (+) |
