G5566


Basic Information

Item Value
gene id G5566
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 32593627 ~ 32596407 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU6815
GCTGTGTCACCCACCGATCAGGATCATGGGGCGGTTCTTCATCTGGGAGATGTTGAACATGCCTGGGAGAGGAAGCAAACAGCAAGGTTACTTTCCACTTCTCTCCACAGCATCGCTCACAACACACAGCAGGGCCTCACCTTATGAGAGCATTTCACAGAAACCATCTGCAGTCTAGAAAACCATTTACAaggcaggaaaagaaaaacaaaacaaaaaacaaacacaccaactcatacaaacacacagaacactGCGTTAAGATGTGTGGATTTAAACTTGCCTGTGACTCCACTGATTTCAATTgcttattcaattaaattactCAGAATAATTCAATTTCAGGTGAGGATGAAGGatgtttaaaattacaaatgccAGTTTCCACTGGCAGACGTGTCCTCCCCGGATGCTTAaacaggtgtttccactggGTTAAACATCTGGACGGTTAGCTATCTGGtgccagacgcccactgaggaaatacttcgctttcagaagtggagatgtgtgcttgacttgtagacagacagggaagagatcagatacattgttttattatagcagcatggagtgaaatccacatacagaaattACTGCTTACTGTTAATAtgcaagtgtattaaaaacttggatttcacaggaccctgGTGCAGTGCTGTCACTAGTTAAAACTAAACCAAAGGATAATAATCGAAGCGGTAGCAgactattttattaatattttatgaacaactggacagtgtttcaggctgtcgtcCTGTGGATGGCTTGCAggtctaaaacattaaggactggtttaataaatgcgtccataagtccataaatgcCAtgactgaaacgtgcacactttagttaaattataaccggctatattgtagctgctgttactgtatgattaatcttgaaatgtgtgcattttgtttcaactgtaacttgccctgtttaaggacgtctgctaagtaaattaaaataatatggcAAGAAGTGTTGCAGTTTgtagttacaaatctgtagtaagagtaataagttaagggagtcaagatgtgccatttaaaatacttatctactagcacatatcttgatgatgattacaataataacaataacaataataaagagcaaatatttatttcattgttgcacatggaaacgttttcttatggtaatgtaatgcttgtctgaatataatgttgtctatacatgtttagctcttcctatATCTCTTAAGTGTACTTATTACAcggtctccaatcatgtaaagaatatagactaaaatagacacaaaagtcctttccacatcagtcTCTATGGctcagtgttgttttctgtctttgttttaaaacaaaacgcAAAATGAAACCCACAAtcactctgctcctcccacaacaggggacggacttgctacaatggcctggttttacaaaaggctctgggacgcgtccggcacggcatggcacaacacggacgcttaagccagtggaaccgaggcaaaAGTGTCCCCGTCTCTGCAAGAAGGGACTGTATCTAAAAAGGCAATGGCTATTTCCGTGTCACTGCGTGCTTCTGTgctgctctgtctctctgtggggCATCACTGAGAGGCTGAGCTCAGCTCGTACCTGCGTGCTGCTTCTTCTTCCGGCCCACGGCGGCCCCAATgatctgcagcagctcctcctcGGAGGCTCCGGAGCGCAGACAGTCCCTGAGAGACACCTCCGCATTGCCAAACAAACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6815 True 1743 TUCP 0.42 3 32593627 32596407

Neighbor

gene id symbol gene type direction distance location
AMCG00004076 NA coding downstream 230501 32349953 ~ 32363126 (-)
AMCG00004077 supt7l,LOC107656753,LOC107726086,LOC107553729,LOC107737450,LOC107697525 coding downstream 259846 32331326 ~ 32333781 (-)
AMCG00004073 lrfn2,LOC106597048,LOC106582474 coding downstream 1025612 31558683 ~ 31568015 (-)
AMCG00004074 NA coding downstream 1054220 31537908 ~ 31539407 (-)
AMCG00004072 NA coding downstream 1273033 31319595 ~ 31320594 (-)
AMCG00004091 daam2 coding upstream 16689 32613096 ~ 32650701 (-)
AMCG00004090 daam2 coding upstream 67257 32663664 ~ 32671871 (-)
AMCG00004094 NA coding upstream 366633 32963040 ~ 32974811 (-)
AMCG00004095 NA coding upstream 386056 32982463 ~ 32985504 (-)
AMCG00004096 syt14,syt14a,LOC101484328,LOC107548616 coding upstream 418121 33014528 ~ 33022148 (-)
G5555 NA non-coding downstream 46621 32545377 ~ 32547006 (-)
G5552 NA non-coding downstream 63789 32527683 ~ 32529838 (-)
G5539 NA non-coding downstream 201517 32391883 ~ 32392110 (-)
G5536 NA non-coding downstream 204658 32387746 ~ 32388969 (-)
G5528 NA non-coding downstream 209944 32383409 ~ 32383683 (-)
G5570 NA non-coding upstream 8481 32604888 ~ 32611344 (-)
G5645 NA non-coding upstream 508318 33104725 ~ 33105215 (-)
G5721 NA non-coding upstream 1029902 33626309 ~ 33627507 (-)
G5805 NA non-coding upstream 1695862 34292269 ~ 34292496 (-)
G5869 NA non-coding upstream 2276206 34872613 ~ 34897907 (-)
G5540 NA other downstream 167064 32407802 ~ 32426563 (-)
G5502 NA other downstream 283717 32309480 ~ 32309910 (-)
AMCG00004060 NA other downstream 1620131 30969679 ~ 30973496 (-)
AMCG00004052 NA other downstream 1698803 30813781 ~ 30894824 (-)
AMCG00004041 NA other downstream 2317400 30273806 ~ 30276227 (-)
AMCG00004102 NA other upstream 969679 33566086 ~ 33567325 (-)
AMCG00004116 NA other upstream 1279034 33875441 ~ 33918321 (-)
AMCG00004120 NA other upstream 1418961 34015368 ~ 34031547 (-)
G5801 NA other upstream 1535691 34132098 ~ 34135600 (-)
G5871 NA other upstream 2295494 34891901 ~ 34892613 (-)

Expression


Co-expression Network