G5569


Basic Information

Item Value
gene id G5569
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 32611833 ~ 32612051 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU6819
CTCTTCAAGGTGGGGTCATATAAGCCCAGCTGGAGCTTTGCTTTGAAGTACGGTGGGATCCTTAGCTGCACTGAAAAGTGCcacataaaattaaattatgttgctTCTTTTGAAGTGCTCCCTTGTCAGGCCCTGCCACAGCTAGTGAGCAGGCCTGTGACACCCCCCGACCATAGAGAACAGGGGAACGTAGAGGAACACTGCCCTCTGGACATCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6819 True 219 lncRNA 0.38 1 32611833 32612051

Neighbor

gene id symbol gene type direction distance location
AMCG00004085 NA coding upstream 11241 32598453 ~ 32600592 (+)
AMCG00004084 mocs1 coding upstream 15432 32583540 ~ 32596401 (+)
AMCG00004086 NA coding upstream 29134 32571579 ~ 32582699 (+)
AMCG00004082 NA coding upstream 52468 32558979 ~ 32559365 (+)
AMCG00004081 bre coding upstream 81994 32499473 ~ 32529839 (+)
AMCG00004087 kif6 coding downstream 116609 32728660 ~ 32774812 (+)
AMCG00004089 NA coding downstream 202692 32814743 ~ 32836681 (+)
AMCG00004088 NA coding downstream 226913 32838964 ~ 32844650 (+)
AMCG00004093 NA coding downstream 264759 32876810 ~ 32900670 (+)
AMCG00004092 gnmt,LOC107748599,LOC107566124 coding downstream 325354 32937405 ~ 32946916 (+)
G5529 NA non-coding upstream 224298 32384435 ~ 32387535 (+)
G5527 NA non-coding upstream 228154 32383409 ~ 32383679 (+)
G5522 NA non-coding upstream 261730 32348390 ~ 32350103 (+)
G5501 NA non-coding upstream 301921 32309505 ~ 32309912 (+)
G5499 NA non-coding upstream 342762 32268748 ~ 32269071 (+)
G5662 NA non-coding downstream 826277 33438328 ~ 33445420 (+)
G5680 NA non-coding downstream 860985 33473036 ~ 33473330 (+)
G5681 NA non-coding downstream 862791 33474842 ~ 33475047 (+)
G5688 NA non-coding downstream 954122 33566173 ~ 33567479 (+)
G5707 NA non-coding downstream 985841 33597892 ~ 33600011 (+)
AMCG00004079 NA other upstream 209450 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 1717006 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 2304658 30296867 ~ 30307175 (+)
G5245 NA other upstream 2340309 30271210 ~ 30271524 (+)
AMCG00004011 ccnc other upstream 3070475 29527414 ~ 29541358 (+)
G5642 NA other downstream 518069 33130120 ~ 33131186 (+)
AMCG00004138 fkbp1b other downstream 2240812 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 3140399 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 3415228 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 3649737 36261788 ~ 36278234 (+)

Expression


Co-expression Network