Gene
RNA
| Item | Value |
|---|---|
| gene id | G5680 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 33473036 ~ 33473330 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU6968 | True | 295 | lncRNA | 0.36 | 1 | 33473036 | 33473330 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004108 | 5nt1a,LOC105899417,LOC102795473 | coding | upstream | 20364 | 33435750 ~ 33452672 (+) |
| AMCG00004100 | osr1 | coding | upstream | 225472 | 33241032 ~ 33247564 (+) |
| AMCG00004101 | NA | coding | upstream | 330498 | 33137636 ~ 33142538 (+) |
| AMCG00004099 | NA | coding | upstream | 337545 | 33132355 ~ 33135491 (+) |
| AMCG00004092 | gnmt,LOC107748599,LOC107566124 | coding | upstream | 526120 | 32937405 ~ 32946916 (+) |
| AMCG00004109 | NA | coding | downstream | 87694 | 33561024 ~ 33565863 (+) |
| AMCG00004110 | NA | coding | downstream | 274579 | 33747909 ~ 33761457 (+) |
| AMCG00004113 | rhob,LOC105888539,LOC103025336,LOC105907285,LOC106607565 | coding | downstream | 293716 | 33767046 ~ 33767636 (+) |
| AMCG00004115 | NA | coding | downstream | 431961 | 33905291 ~ 33912885 (+) |
| AMCG00004121 | NA | coding | downstream | 646241 | 34119571 ~ 34130023 (+) |
| G5662 | NA | non-coding | upstream | 27616 | 33438328 ~ 33445420 (+) |
| G5569 | NA | non-coding | upstream | 860985 | 32611833 ~ 32612051 (+) |
| G5529 | NA | non-coding | upstream | 1085501 | 32384435 ~ 32387535 (+) |
| G5527 | NA | non-coding | upstream | 1089357 | 32383409 ~ 32383679 (+) |
| G5522 | NA | non-coding | upstream | 1122933 | 32348390 ~ 32350103 (+) |
| G5681 | NA | non-coding | downstream | 1512 | 33474842 ~ 33475047 (+) |
| G5688 | NA | non-coding | downstream | 92843 | 33566173 ~ 33567479 (+) |
| G5707 | NA | non-coding | downstream | 124562 | 33597892 ~ 33600011 (+) |
| G5720 | NA | non-coding | downstream | 153037 | 33626367 ~ 33627507 (+) |
| G5731 | NA | non-coding | downstream | 212397 | 33685727 ~ 33768814 (+) |
| G5642 | NA | other | upstream | 341850 | 33130120 ~ 33131186 (+) |
| AMCG00004079 | NA | other | upstream | 1070653 | 32400405 ~ 32402383 (+) |
| AMCG00004056 | ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 | other | upstream | 2578209 | 30887995 ~ 30894827 (+) |
| AMCG00004039 | NA | other | upstream | 3165861 | 30296867 ~ 30307175 (+) |
| G5245 | NA | other | upstream | 3201512 | 30271210 ~ 30271524 (+) |
| AMCG00004138 | fkbp1b | other | downstream | 1379533 | 34852863 ~ 34870320 (+) |
| AMCG00004158 | NA | other | downstream | 2279120 | 35752450 ~ 35766180 (+) |
| AMCG00004160 | LOC106571404,LOC106607809,LOC105897019 | other | downstream | 2553949 | 36027279 ~ 36045282 (+) |
| AMCG00004167 | NA | other | downstream | 2788458 | 36261788 ~ 36278234 (+) |
| AMCG00004179 | ptrhd1,LOC103399259 | other | downstream | 3214300 | 36687630 ~ 36697885 (+) |
